Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g02150 ATGCTCCCAAACCGTGAAGCTATTGTTGTCGACAAACTGATTTCAAAATACCAAGCTGCGGAGTATATTTTGACCCTTCCTATCAGTTTTGTTCAAAGGGCCTTTGGGATTAAACCTGATCAAGTCGACGTTGTCGATGATGCTGGTGTGTGTTACAAGGTCCACGTTCGCTCGAAGCCAAGTCGGCCTCGAGAGTGCTATTTCGCTAAGGGGTGGAGGCCTTTTAGTCAGCACCACATGCTGCGTACTGGAAGCGCCATTAGGCTAATGCATCTACAATTCTCTGCAGTTACTCAGCTGCTGGACTCATATTTTCTTCTTGTGCTTCTTCGAGACCCAAATCCAATCCACCAAATGGATCAGAAATTTGATTCTGTGAAAGACCTTTCTCTCATTTCAAAGAAGAACTGGTGCATTAAAGTAAAAATTTTGAGGATGTGGAAGGTTCCGTCATATGAAAAGAGCTACTCGCAACCTTCAATGGAGTTGGTTGTCATTGACAAAGATGGAACTCAGATCCATTTTTTCATCCGGTCTGTCCATTATCGACTTTTTGAACCTATCCTTGAGGAGGGAAAGGTGTTTGTTGTGGGCAACTTCGCAATGGACTCAAACACACAGAAATACAGACCTACCAAGCATAGCATGCGGATCATATTTAAGAGGGACACATTGGTGTCTGGTGCTGATGACATGGATATTCCAATTGAGTCATTTGATTTCGTGGCAACCAAGGAAATCTTATCATCCGTTAAGGATGACTTATATCTTATTGATTTTGTTGGTCTACTGTCCACAAAGAGTGAGTTGATTCCTTTTGAATATAGGAATCGGAAGTCACATTACATGAAAATCGAGCTTGATGATCTAAGTGGCAGTGAGAAACTTTCATGCACCTTGTGGGAAAATTATGCCTCTGAATTGATAACTCTTCTTGATGCGAACAAGGCCACTGAATTTATAATTGTGCTCCAATTTGCCAAGATGAAGTTCTACAATGGTGTTATGACTATAACCAACACAAACTACACCACAAGGCTCATGGTTAATGCTGATCTTGAAGTGGTTAAGAAATTCCGTCAAAAGCTGATTCGACTTGGTAGCAAGCACAGCACCAGCGTTGAAGTTATTGGCCGGGTAGTGAGGCATTCTCCATCTGAAGATTTTCTCAGCCTTACCCCTTATGCTACCATACATCAAATAAAGGAAACTCTTGAGAAATCAACCTTTGTCACATGTGGAACGGTAATTGACATTGACAGGGATCATGCATGGTGGTACAAGGCTTGCAGGCAATGCACCCAGGGACTGGAAGCACTTACTAACCAATTTTATTGTGCAAAGTGCGATGTTTACTCTACAATTTTTGCCCCCAGGTTCTGCATTCAGGTTTGTGTTGGTGATGAGTCAGATACCGCAACTTTTGTTCTATTTGAGAATTGTGCGTCAAAGTTCTTAGGTCTAACTGCCGCTGAGATCCGCACCAGACTGCTTGCTAGGCTGCCAACTTACTGGCTTCTTCTGTTCAACAACCAGGGATATGGAAGAGACCATTTCCCAAATGAGCTTAATACACTGATTGGGAGGACACTTCTGTTCAAGCTTACTGTTAGGCATGATAGCTTAAATAAATTTCAGCAGTGCGTGATTACCGTTTCAAGGATATGTTCTGACCCAGACATTATCTCCTCACTTGCTTTAGAAAAGAACATTAAATTGGTGTGTGTCGTTGAGTGCTCCACAGAGGACTTTCAATTACCATTGCTTATTCAAATCAATGACTTGGTTGGGTCTGAGAGCATACTCGGCGTCCCTGGATCCACCACCACTCCGAGTCCCAATTCTGATGCAGTTTCTGGTCACGGGGCTGCCCACGTGGTTACACATACTCCTGTTAAGCGGGTTTGCATTAGATCCGGTGGCGACTTCTCATCCCGTGCCACACCCTCTGCCTCCAAGAGTCTCCTCCCTGCCTTTGAGAGCTGCGTCCCAGGGAATGTCACCAACCCTGATGCAGGGGACATATGA 2028 0.4393 MLPNREAIVVDKLISKYQAAEYILTLPISFVQRAFGIKPDQVDVVDDAGVCYKVHVRSKPSRPRECYFAKGWRPFSQHHMLRTGSAIRLMHLQFSAVTQLLDSYFLLVLLRDPNPIHQMDQKFDSVKDLSLISKKNWCIKVKILRMWKVPSYEKSYSQPSMELVVIDKDGTQIHFFIRSVHYRLFEPILEEGKVFVVGNFAMDSNTQKYRPTKHSMRIIFKRDTLVSGADDMDIPIESFDFVATKEILSSVKDDLYLIDFVGLLSTKSELIPFEYRNRKSHYMKIELDDLSGSEKLSCTLWENYASELITLLDANKATEFIIVLQFAKMKFYNGVMTITNTNYTTRLMVNADLEVVKKFRQKLIRLGSKHSTSVEVIGRVVRHSPSEDFLSLTPYATIHQIKETLEKSTFVTCGTVIDIDRDHAWWYKACRQCTQGLEALTNQFYCAKCDVYSTIFAPRFCIQVCVGDESDTATFVLFENCASKFLGLTAAEIRTRLLARLPTYWLLLFNNQGYGRDHFPNELNTLIGRTLLFKLTVRHDSLNKFQQCVITVSRICSDPDIISSLALEKNIKLVCVVECSTEDFQLPLLIQINDLVGSESILGVPGSTTTPSPNSDAVSGHGAAHVVTHTPVKRVCIRSGGDFSSRATPSASKSLLPAFESCVPGNVTNPDAGDI 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g02150 675 Gene3D - 390 564 IPR012340 -
Arst7g02150 675 Pfam Domain of unknown function DUF223 162 244 IPR003871 -
Arst7g02150 675 SUPERFAMILY Nucleic acid-binding proteins 122 231 IPR012340 -
Arst7g02150 675 CDD RPA1_DBD_C 398 572 IPR047192 -
Arst7g02150 675 ProSiteProfiles B3 DNA-binding domain profile. 9 113 IPR003340 GO:0003677
Arst7g02150 675 SUPERFAMILY Nucleic acid-binding proteins 239 361 IPR012340 -
Arst7g02150 675 Gene3D - 10 98 IPR015300 -
Arst7g02150 675 Gene3D - 232 374 IPR012340 -
Arst7g02150 675 CDD RPA1_DBD_A_like 138 226 - -
Arst7g02150 675 CDD RPA1_DBD_B_like 259 361 - -
Arst7g02150 675 SUPERFAMILY Nucleic acid-binding proteins 393 557 IPR012340 -
Arst7g02150 675 SUPERFAMILY DNA-binding pseudobarrel domain 16 92 IPR015300 -
Arst7g02150 675 Gene3D - 121 228 IPR012340 -
Arst7g02150 675 PANTHER OS03G0429900 PROTEIN 133 558 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Arst7g02150 675 Pfam Replication factor-A C terminal domain 412 554 IPR013955 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g02150 Arst-Chr7 49022480 49028583 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g02150 136 552 Core DNA Replication Machinery Family AT5G08020 21.412 2.39e-15 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g02150 - - adu:107458794 1357.81