Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g02123 ATGACAGAAGTTGTAGCAGAACTCGATTTGAATCAACAGCCTTTGCATGACATAGAAGAGCGAATTAGACGCCTAGAAGGCATAATTTTCAGAGTTAGGCAGCGGCAGAGGTGGTGCCGTAGTGATAGTCCTGTCCGAATGACTACATTCGCCGGAGAAGTGTTGGTTGATGGGGTTCAAGATGAAGGCAGACCACAGCTGGAAGAAGTAGAGGCCGGAGATGATGTCAAAGAAAATGGTAATGTGGAAAGCAGCAGTTGTAGGGGCAAAAGGAAGGCATCTGCATATTTGGTTGCTAAGGCGCTGGGGATGGAAACTAACACCGATAAGGCAAAGGGACGCGCAGGAAACTATTTTGATTGTAACATATGCTTGAAAATGGCAAGAGATCCTGTTTTGACTTGCTGCGGTCACTTGTTCTGCTGGCCCTGCTTCTTTCGCTTGTCGTATGCTTATGCAAATGCTAGGGAATGCCCTGTATGTGAAGGAGAGGTCATGATCACATGCATTACTCCAATTTATGGATCTGTAGGTGTCAATGACAGTGATCAGCTAGAATCAGAAGAGAATGGTTGTGAAATTCCTGCTCGACCTTGTGCGCGCAGAGTTAAGGTTAGCAAGGTGAAGTGTTTCAGAAACCGTGGTTTTCCAATAAATAATCCCCGTACTTCAGCTCAAAGTTCAAGTACAGTAATCCAAGGAATCGCCTTACCTTCACCGCCAATCACTCCGCCGCAAAGACCTTTAGAGGGACTTGATTCCTATCTTGGAAGTGACTCTGAAGGAAGCACCATGCAGCTGAATCATAATGCTGCTTCGAACCATTCAGAGTCACATAATCAAAATGTTATTGCTGCAGCCGCCACATCTTCTGTTACTCCTTTGACTATGAATGATGATGCTATTGCTATTACAGATTCCAGTACACAAATCACCAATAGTAGTGGACAGATTATTTCTTCCGACCGTTCATCTCTAGTCGAATTGATGTAG 993 0.4471 MTEVVAELDLNQQPLHDIEERIRRLEGIIFRVRQRQRWCRSDSPVRMTTFAGEVLVDGVQDEGRPQLEEVEAGDDVKENGNVESSSCRGKRKASAYLVAKALGMETNTDKAKGRAGNYFDCNICLKMARDPVLTCCGHLFCWPCFFRLSYAYANARECPVCEGEVMITCITPIYGSVGVNDSDQLESEENGCEIPARPCARRVKVSKVKCFRNRGFPINNPRTSAQSSSTVIQGIALPSPPITPPQRPLEGLDSYLGSDSEGSTMQLNHNAASNHSESHNQNVIAAAATSSVTPLTMNDDAIAITDSSTQITNSSGQIISSDRSSLVELM 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g02123 330 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 95 231 IPR013083 -
Arst7g02123 330 ProSiteProfiles Zinc finger RING-type profile. 121 162 IPR001841 -
Arst7g02123 330 Pfam zinc-RING finger domain 121 162 IPR001841 -
Arst7g02123 330 SMART ring_2 121 161 IPR001841 -
Arst7g02123 330 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED 85 274 IPR045103 GO:0005783|GO:0006511|GO:0061630
Arst7g02123 330 SUPERFAMILY RING/U-box 117 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g02123 Arst-Chr7 46267055 46269063 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g02123 78 204 C3H Transcription Factor Family AT3G58030 42.520 9.51e-29 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g02123 - - adu:107458846 661.759