Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g02122 ATGATATATTGTGGGTCTTATGAGTGTGGGTCTTATGATACCTTAAGGACTTTGATACATTTGAAATGTGGTGGTGCTGATGGGATCACAAAACTGAGCAAAATGACAGAAGTTGTAGCAGAACTCGATTTGAATCAACAGCCTTTGCATGACATAGAAGAGCGAATTAGACGCCTAGAAGGCATAATTTTCAGAGTTAGGCAGCGGCAGAGGTGGTGCCGTAGTGATAGTCCTGTCCGAATGACTACATTCGCCGGAGAAGTGTTGGTTGATGGGGTTCAAGATGAAGGCAGACCACAGCTGGAAGAAGTAGAGGCCGGAGATGATGTCAAAGAAAATGGTAATGTGGAAAGCAGCAGTTGTAGGGGCAAAAGGAAGGCATCTGCATATTTGGTTGCTAAGGCGCTGGGGATGGAAACTAACACCGATAAGGCAAAGGGACGCGCAGGAAACTATTTTGATTGTAACATATGCTTGAAAATGGCAAGAGATCCTGTTTTGACTTGCTGCGGTCACTTGTTCTGCTGGCCCTGCTTCTTTCGCTTGTCGTATGCTTATGCAAATGCTAGGGAATGCCCTGTATGTGAAGGAGAGGTCATGATCACATGCATTACTCCAATTTATGGATCTGTAGGTGTCAATGACAGTGATCAGCTAGAATCAGAAGAGAATGGTTGTGAAATTCCTGCTCGACCTTGTGCGCGCAGAGTTAAGGTTAGCAAGGTGAAGTGTTTCAGAAACCGTGGTTTTCCAATAAATAATCCCCGTACTTCAGCTCAAAGTTCAAGTACAGTAATCCAAGGAATCGCCTTACCTTCACCGCCAATCACTCCGCCGCAAAGACCTTTAGAGGGACTTGATTCCTATCTTGGAAGTGACTCTGAAGGAAGCACCATGCAGCTGAATCATAATGCTGCTTCGAACCATTCAGAGTCACATAATCAAAATGTTATTGCTGCAGCCGCCACATCTTCTGTTACTCCTTTGACTATGAATGATGATGCTATTGCTATTACAGATTCCAGTACACAAATCACCAATAGTAGTGGACAGATTATTTCTTCCGACCGTTCATCTCTAGTCGAATTGATGTAG 1095 0.4411 MIYCGSYECGSYDTLRTLIHLKCGGADGITKLSKMTEVVAELDLNQQPLHDIEERIRRLEGIIFRVRQRQRWCRSDSPVRMTTFAGEVLVDGVQDEGRPQLEEVEAGDDVKENGNVESSSCRGKRKASAYLVAKALGMETNTDKAKGRAGNYFDCNICLKMARDPVLTCCGHLFCWPCFFRLSYAYANARECPVCEGEVMITCITPIYGSVGVNDSDQLESEENGCEIPARPCARRVKVSKVKCFRNRGFPINNPRTSAQSSSTVIQGIALPSPPITPPQRPLEGLDSYLGSDSEGSTMQLNHNAASNHSESHNQNVIAAAATSSVTPLTMNDDAIAITDSSTQITNSSGQIISSDRSSLVELM 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g02122 364 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 130 265 IPR013083 -
Arst7g02122 364 ProSiteProfiles Zinc finger RING-type profile. 155 196 IPR001841 -
Arst7g02122 364 Pfam zinc-RING finger domain 155 196 IPR001841 -
Arst7g02122 364 SUPERFAMILY RING/U-box 151 201 - -
Arst7g02122 364 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED 119 308 IPR045103 GO:0005783|GO:0006511|GO:0061630
Arst7g02122 364 SMART ring_2 155 195 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g02122 Arst-Chr7 46267055 46269063 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g02122 112 238 C3H Transcription Factor Family AT3G58030 42.520 3.73e-28 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g02122 - - adu:107458846 733.791