Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g02053 ATGACTATACCATCGGCACCGCCGCCCTTTGCCTTAACGGTGCTCTGCGCTGGCTGCAGCACGCCACTGACCACGTCGATGAACGTCGTGGAGTTCGTTTGCCCTGCTTGCCAAATGCCGCAGCGGTTGCCGCCGATGCCATTACCACCACTTCCACCACCATCAGTATCACCGCCACAATCGCAACCACCAGTACCGCCGGCTGGAGCGGCTGCGAAGAAGCGGAAACACGCCACGGAGACTAGCAAGCTACGCAAGAAGCAGAACGGCGGCTCTGGTTCAAGTAAGGTTGAGGTTCCATGCAGATGCTGCAAAGAGGTTTTTTCCGTTCCAGCTAGTCTCACGAAGTTCGCTTGCCCTAAGTGTGGTGTTGAGAACCCCGTCGAGACCGAAGAAATCAATGAGCTAGCGGTTGAGGTTGAACGTGAGGAAGATGAAGGCGGAACAGCAGGAGAAACATTTACAGATTATCGGCCAGCAAAAGTATCTATGGGACCTCCGCACCCAGATCCTGTTGTTGAGACTTCTTCCTTGTCTGCAGTGCAGTCACCTGAACCTACTTATGATCCAATACTTAAAGATTATTTGGAAAGTTCAAAGGCTTTGTCATGCCTGCAGATAGAGACATTGGTCTATGCTTGTCAGAGGCATCTTCTACACCTTCCAGACGGCACAAGGGCAGGATTTTTTATTGGGGATGGAGCTGGTGTTGGTAAGGGCCGCTCAGTTGCTGGGCTTATTTGGGAGAACTGGCAGCAAGGACGGGAAAAGGCGTTATGGATTTCTGTTGGTTCAGACTTGAAGTTTGATGCCAGAAGAGACTTGGATGATATGGGTGCAACTTGTGTTAAAGTGCATGCTTTGAACAAACTGCCTTATTCTAAGCTTTCTTCGAAGTCTGTTGGAGTCAAGGATGGGGTTGTTTTCTCAACTTACAGTAGCCTCATAGCATCCTCTGATAAGGGTCAATCTCGTCTCAAACAACTTGTGCAGTGGTGTGGGCCAAAGTTTGATGGTCTTATAATATTCGATGAGTGTCACAAAGCGAAAAACTTGATGCCGGAAGCTAAAGGTGGTATGCAGCCAACACAAACTGGCAAAGCAGTGCTTGATATACAGTCTCAACTACCCGAAGCTCGTGTTGTTTATTGTTCTGCCACTGGTGCATCTGAACCTCGCAACATGGCTTATATGGTTCGACTTGGCCTTTGGGGTGATGGAACTTCTTTCTGTGATTTCAAGGAATTTTTAGGTGCACTTGACAAAGGGGGTGTAGGAGCTCTAGAACTAGTTGCCATGGACATGAAAGCAAGGGGAATGTATTTATGTCGGACCCTTAGCTACAAGGGTGCTGACTTTGAAGTTATTGAAGCACCATTAGAGGATAAGATGATGGACATATATGAAAAAGCTGCAAAATTTTGGTTGGAACTGCGTGTGGATTTACTGTCTACAACTTCCAATGCCTTTTTAAATGTGAAATTTGATTCACGTACACTGTGGAGATTATACTGGTCATGCCACCAGCGTTTCTTTAGACACATGTGTTTGTCCGCTAAAGTACCTGCTACTGTGAGACTAGTGAAGCAAGCATTGATGGAAGATAAGTGTGTAGTTATAGGACTGCAGAGTACTGGGGAAGCCAGGACTGAAGGAGCTGTGGCAAAATACGGTTTTGAACTTGATGATTTCATTTCTGGGCCTGAAGGGTTGCTGGAAAAATTTGTAGATGACTGTTTTCCATTGCCAGAGAACCCCGAACTTCATGAAAAGGATGCATTGCTTGATCTCGAGGGGATGGGGCACTCAACGAGTCCTTGTGTATCAGGAAAAGTAAAGGGCAGGAACATAGCTAAGGTGCATCCTTCTAGTAATATTGAAAGTTACGAAGAATCTGAAACTGACACTGATCCTGAAATGGATGAATCTGATTATGAACCAGAAGGTGAAGAGAGTGCTGCCTCTGCTCTTGAATCTAGTGACTCTGATTATGATGAGCTTCAGACATGTGAATTATGCAGCTTAGAGGAGGAAAGGCATAATTTGCTTTCATGCTCCGGCTGTGGTAAACTGGTCCATCAAGAATGCTTAAGTCCCCCAATTCACAATTTAACTCCAGAAAAATGGTTATGCACTGTGTGCAAAGGAAGAACAAATGACATCCAACCAGGTCCTGACTACCTAACTGAACTCAAGAAGAGGTTTGGCACATGTTTTAACGAATTCTGTAACTTGATTATTGTTCTGATCAATCCCTTGGATGATATTATTGATCAGTTAGGAGGCACTGAAAAAGTTGCTGAAATCACAGGAAGAAAAGGCAGGCTTGTGAGGGCCCCTTCGGGAAAGGGTGTAATTTACGAGCCTCGTAACAAAAAAGATATCAGTATGGAGATGGTAAACATGCATGAAAAGAAGCTTTTTTTGGATGCTAAGAAGTTTGTAGCTATTATATCTGAAGCCGGATCTGCGGGTTTTTCATTGCATGCAGATAGAAGGGTTATTAATCAGAAAAGAAGGGTTCATATAACTTTAGAACTTCCTTGGAGTGCTGACAAAGCAATTCAGCAGTTTGGAAGAACTCATCGATCAAATCAAGCTTCAGCTCCAGAATACAGGGTACTCTTTAGTAACCTTGGTGGTGAACGAAGGTTTGCATCTGTTGTTGCTAAAAGATTAGAATCTCTTGGTGCTTTGACTCAGGGGGATCGCAGGGCTGGACCTTCATTAAGTGCTTACAATTATGATAGTAGTTATGGAAAGAGGGCTCTAATGATTATGTACGAAGGAATATTGGAACAGGATTCTCTTCCTGTTGTTCCTCCTGGATGTTTATCTGACAATCCTGTTACAATCAATGAATTTATTATGGAAGCAAAATCTGCTCTTCTATCTGTTGGAATAGTTAAAGGATATGAGGAACATTCTGGAAGTTTATCTGGCTACATTAGTGATAATGATATGCAAGATGTTCGGCGATTCCTCAATCGGCTTCTAGGACTTCCTCCTGATATTCAGAATAGGCTTTTTGAATTATTTGCGAGCATATTTGATCATCTCATTCAGGATGCTCGCATTGAAGGTAACCTTGATACAGGCATTGTGGATATGAAGGCTAATGTTGTAGAACTACAAGGGACTCCAAAGACAGTTTATATTGATCCAGTGACGGGGGCTTCAACGGTTCTGTTCACTTTCATCTTGGATAGGGGGACCACATGGCAGCTGGCAACCTCCATGCTGAATGAGAAGCAGAAGGGTGGGCTTGGATCAGTCAATGATGGTTTCTACGAGTCTAAGAGGGAGTGGTTAGGAAGGCGTCATTTCATTTTAGCATTTGAAAGTTCTGTTTCGAATATGTATAAGATAGTTCGCCCTACTGTTGGAGAATCCTTTCGGGACATGCATCTGTCAGAATTAAAAAGGAAATATAAAAAAGTTTCATGTTTAAAGAATGCTCAAAAAGGATGGGAAGTGGAATATAATGTTTCATCTAAACAGTGCATGCACGGTCCCAAATGTAAGCTTGGCAACTTCTGTACTGTTGGCCGAAGTCGGCAGGAAGTAAATATCTTGGGTGGTGCCATTCTTCCTCTTTGGCGAGCTATTGAGAAGGCCCTTTCTAATCAGTTGCGCCGAAACCATAGGAGGCTACGTGTTGTTCGCATTGAGACTTCTGCTGATAACCAGCATATAGTTGGCGTTCTTGTTCCTAATGCAGCTGTTAAATCCGTCCTTCAAGGTTTGGAATGGGTTCCAGCTGATGATAATTGA 3774 0.4401 MTIPSAPPPFALTVLCAGCSTPLTTSMNVVEFVCPACQMPQRLPPMPLPPLPPPSVSPPQSQPPVPPAGAAAKKRKHATETSKLRKKQNGGSGSSKVEVPCRCCKEVFSVPASLTKFACPKCGVENPVETEEINELAVEVEREEDEGGTAGETFTDYRPAKVSMGPPHPDPVVETSSLSAVQSPEPTYDPILKDYLESSKALSCLQIETLVYACQRHLLHLPDGTRAGFFIGDGAGVGKGRSVAGLIWENWQQGREKALWISVGSDLKFDARRDLDDMGATCVKVHALNKLPYSKLSSKSVGVKDGVVFSTYSSLIASSDKGQSRLKQLVQWCGPKFDGLIIFDECHKAKNLMPEAKGGMQPTQTGKAVLDIQSQLPEARVVYCSATGASEPRNMAYMVRLGLWGDGTSFCDFKEFLGALDKGGVGALELVAMDMKARGMYLCRTLSYKGADFEVIEAPLEDKMMDIYEKAAKFWLELRVDLLSTTSNAFLNVKFDSRTLWRLYWSCHQRFFRHMCLSAKVPATVRLVKQALMEDKCVVIGLQSTGEARTEGAVAKYGFELDDFISGPEGLLEKFVDDCFPLPENPELHEKDALLDLEGMGHSTSPCVSGKVKGRNIAKVHPSSNIESYEESETDTDPEMDESDYEPEGEESAASALESSDSDYDELQTCELCSLEEERHNLLSCSGCGKLVHQECLSPPIHNLTPEKWLCTVCKGRTNDIQPGPDYLTELKKRFGTCFNEFCNLIIVLINPLDDIIDQLGGTEKVAEITGRKGRLVRAPSGKGVIYEPRNKKDISMEMVNMHEKKLFLDAKKFVAIISEAGSAGFSLHADRRVINQKRRVHITLELPWSADKAIQQFGRTHRSNQASAPEYRVLFSNLGGERRFASVVAKRLESLGALTQGDRRAGPSLSAYNYDSSYGKRALMIMYEGILEQDSLPVVPPGCLSDNPVTINEFIMEAKSALLSVGIVKGYEEHSGSLSGYISDNDMQDVRRFLNRLLGLPPDIQNRLFELFASIFDHLIQDARIEGNLDTGIVDMKANVVELQGTPKTVYIDPVTGASTVLFTFILDRGTTWQLATSMLNEKQKGGLGSVNDGFYESKREWLGRRHFILAFESSVSNMYKIVRPTVGESFRDMHLSELKRKYKKVSCLKNAQKGWEVEYNVSSKQCMHGPKCKLGNFCTVGRSRQEVNILGGAILPLWRAIEKALSNQLRRNHRRLRVVRIETSADNQHIVGVLVPNAAVKSVLQGLEWVPADDN 1257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g02053 1257 MobiDBLite consensus disorder prediction 48 66 - -
Arst7g02053 1257 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 807 911 IPR027417 -
Arst7g02053 1257 PANTHER STRAWBERRY NOTCH-RELATED 85 1252 IPR026741 GO:0006355
Arst7g02053 1257 Pfam C-terminal domain on Strawberry notch homologue 751 1036 IPR026937 -
Arst7g02053 1257 PANTHER STRAWBERRY NOTCH-RELATED 85 1252 IPR026741 GO:0006355
Arst7g02053 1257 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 653 734 IPR013083 -
Arst7g02053 1257 SUPERFAMILY FYVE/PHD zinc finger 658 717 IPR011011 -
Arst7g02053 1257 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 412 IPR027417 -
Arst7g02053 1257 MobiDBLite consensus disorder prediction 139 159 - -
Arst7g02053 1257 FunFam Protein strawberry notch homolog 2 198 400 - -
Arst7g02053 1257 ProSiteProfiles Zinc finger PHD-type profile. 667 717 IPR019787 -
Arst7g02053 1257 MobiDBLite consensus disorder prediction 630 651 - -
Arst7g02053 1257 ProSitePatterns Zinc finger PHD-type signature. 670 714 IPR019786 -
Arst7g02053 1257 Pfam PHD-finger 670 715 IPR019787 -
Arst7g02053 1257 MobiDBLite consensus disorder prediction 48 97 - -
Arst7g02053 1257 Gene3D - 196 400 IPR027417 -
Arst7g02053 1257 SMART PHD_3 669 715 IPR001965 -
Arst7g02053 1257 Pfam P-loop containing NTP hydrolase pore-1 167 469 IPR039187 -
Arst7g02053 1257 MobiDBLite consensus disorder prediction 620 663 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g02053 Arst-Chr7 41699139 41723712 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Arst7g02053 AAA_34 8.5e-131 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g02053 K26273 - gmx:100808670 1667.13