Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g02007 ATGTCGGAAATATTCCATGCTGGTGGAGATGTTGTAAGTAGAAATCTCAAGCGCAAGTTAGAGGAGCCACCAGCCGCGGACCATGACTCAGAGGTGTTACTTTCTTTGAGTCTTGGCCGCAACAACAATAACATGGAAACTGGCGACTCATCCTCCAATTTCACATTCAAATCCTTGAAAACTGCTGAAAACCAGACGAAGCAAGAACGCTTGTTTCCTTGCAAGTTTTGCAACAAGAAATTCGCCAGCTCTCAAGCATTAGGCGGACATCAAAATGCTCATAAGCGCGAGAGAGTCCTCTCAAAAATGGACAAAATGTTTAACAGGGGAACATTTGCGCTTGATGCTAGTCATCAATTATGTGCATACCCAACAACCATGACAAATTATCTACCCTACCGTGGCTCAAACTCAATACCTTTGTATCAAGGTGCACATATGCACCACCACATACTTCATATGCCTTGCACCATGCCTGGTTTTCGTTCAGGATCATCTAGCTATGGAAACCAAGGCTTACGCAACATTCCTCTGAATTCTCGCCACCACGGCCACCACCGAGATGCTGGATTTGGTTTTGGAATTACTCAACTTCCTTCATCGAGAGAAGTTCCGGGTGATAGAAGTTCTATGGTTCATGCTAATCTCGGTAGCCTTCTTAGAAATAACTAA 672 0.442 MSEIFHAGGDVVSRNLKRKLEEPPAADHDSEVLLSLSLGRNNNNMETGDSSSNFTFKSLKTAENQTKQERLFPCKFCNKKFASSQALGGHQNAHKRERVLSKMDKMFNRGTFALDASHQLCAYPTTMTNYLPYRGSNSIPLYQGAHMHHHILHMPCTMPGFRSGSSSYGNQGLRNIPLNSRHHGHHRDAGFGFGITQLPSSREVPGDRSSMVHANLGSLLRNN 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g02007 223 Gene3D Classic Zinc Finger 46 118 - -
Arst7g02007 223 ProSiteProfiles Zinc finger C2H2 type domain profile. 72 99 IPR013087 -
Arst7g02007 223 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 23 171 IPR044246 GO:0009788
Arst7g02007 223 ProSitePatterns Zinc finger C2H2 type domain signature. 74 94 IPR013087 -
Arst7g02007 223 Pfam C2H2-type zinc finger 72 96 - -
Arst7g02007 223 SUPERFAMILY beta-beta-alpha zinc fingers 68 99 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g02007 Arst-Chr7 38259413 38260084 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g02007 70 138 C2H2 Transcription Factor Family AT5G14010 46.479 1.86e-12 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g02007 - - adu:107458588 460.685