Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g01988 ATGGATAAATCTGAGCAGACTCAGCAGCAGCAGCAACAACAACAACAGCATGTGATAGGTGTTGCAGCAAGTGCTAGCCAAATGGCTTATTCTTCTCACTACCCGACTGCTCCTATGATGGCATCTGGTACACCTGCTGTAGTTGTGCCTTCACCGACGCAGTCTCCAACCGCTTTTTCCAATTCCCCGCACCAGCTTGCATACCAGCAAGCGCAACACTTCCATCACCAGCAACAGCAGCAACAGCAGCAGCAGCTTCAACTGTTCTGGGCAAACCAAATGCAAGAAATTGAGCAAACAATTGACTTTAAGAACCACAGCCTCCCCCTTGCTCGCATTAAAAAGATCATGAAAGCCGATGAAGATGTCCGGATGATTTCAGCAGAAGCTCCAGTAATATTCGCAAAAGCATGTGAAATGTTCATCCTGGAGTTGACTTTGCGATCTTGGATCCACACCGAAGAGAACAAGAGGAGAACTCTGCAAAAGAATGATATAGCAGCTGCTATTTCGAGAAATGATGTTTTTGATTTCTTGGTTGATATCATTCCAAGAGATGAGTTGAAAGAGGAGGGACTCGGAATAGCAAAGGCTACTATTCCAATAGTGGGTTCTCCGGCTGATATGCCATATTATTATGTCTCTCCGCAGCACCCTGTAGGGCCTCCAGGGATGATAATGGGAAAGCCAGTTGATCAAGCAGCACTGTATTCCACACAGCAGCCTCGAGCTCCGATGGCTTTCATGCCATGGCCGCAGGCGCCCTCGCAACAGCAGCCACCCTAA 786 0.4784 MDKSEQTQQQQQQQQQHVIGVAASASQMAYSSHYPTAPMMASGTPAVVVPSPTQSPTAFSNSPHQLAYQQAQHFHHQQQQQQQQQLQLFWANQMQEIEQTIDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRNDVFDFLVDIIPRDELKEEGLGIAKATIPIVGSPADMPYYYVSPQHPVGPPGMIMGKPVDQAALYSTQQPRAPMAFMPWPQAPSQQQPP 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g01988 261 Gene3D Histone, subunit A 68 185 IPR009072 GO:0046982
Arst7g01988 261 SUPERFAMILY Histone-fold 64 179 IPR009072 GO:0046982
Arst7g01988 261 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 56 208 - -
Arst7g01988 261 FunFam Nuclear transcription factor Y subunit gamma 73 185 - -
Arst7g01988 261 Pfam Core histone H2A/H2B/H3/H4 61 170 IPR007125 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g01988 Arst-Chr7 36919096 36922152 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g01988 86 217 CCAAT-HAP5 Transcription Factor Family AT1G56170 87.218 1.26e-81 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Arst7g01988 CBFD_NFYB_HMF 2.2e-17 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g01988 K08066 - gmx:100796987 387.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst7g01988 7 36919096 36922152 Arst7g01988 7 36919096 36922152 ECH