Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g01916 ATGGGGCACCGTTGCTGCACCAAACAGAAGATCAAAAGAGGGTTGTGGTCTCCTGAAGAAGATGAGAAGCTTCTCAGATATATCACAACTCATGGCCACAAAAGTTGGAGTTCTGTCCCTAAATTTGCAGGATTGCAAAGATGCGGAAAGAGTTGCAGATTGAGATGGATAAATTACCTGAGGCCAGATCTGAAGAGGGGTTCCTTCACTTTAGAGGAAGAGCAGATCATAATTGACATTCATAGAATTCTCGGAAACAGATGGGCTCAAATAGCGAAGCACCTACCTGGTAGAACAGACAATGAGGTCAAGAATTTCTGGAACTCTTGCATTAAAAAGAAGCTCATATCTCAAGGCCTAGATCCACAAACACACACTCTTCTCTCTTCTCACAGGAGAATTACAACCTCATCATCATCAAACTTCTCTAACAATAATAATGATTCCTTTCTCATTATTACTTCAAATATGCCAAACAGTGTTAATAATAATGCTCCCATTATTGAAACTAGCCAAGGCCTTTCTTCTTCTTCTTCACTACCTACCAATAATCAGGCTCAACCAAGTGTTGTTCAAGCACCGTCTAGCATTGTTACCTCATCGGATTTTTGTTATGAACCATCAAGAATAATAGAGAATAATAATAGTAATAATAGTAATGTCTCCAATATTATTTGTTCTCATAATTATTCACCCATGAATAATAGTATCCCATCTAAGAATAGCTTATTATGGAATTCAAGGACTGATCATGATGCTGAAGATTTCAGAGTTCAGACATTGGAAGAAGGGCAAGGAATGCAACATTCACTACATGCTGCTGATGATGATGATGATGACGAGATCAGAGAAGCTAATAATATCATTGAGATGAATACTAATGCTTCTTTGGAGGGCTCCAATAATGATAATAACAATAATAATAATTTTGACTTTGGGTTGCTAGAAAGTGTACTTAACTCTGAATTCATGTCTCATGATATCAACTATATGGATGAACTTGCATGGAACTTTTAG 1017 0.3717 MGHRCCTKQKIKRGLWSPEEDEKLLRYITTHGHKSWSSVPKFAGLQRCGKSCRLRWINYLRPDLKRGSFTLEEEQIIIDIHRILGNRWAQIAKHLPGRTDNEVKNFWNSCIKKKLISQGLDPQTHTLLSSHRRITTSSSSNFSNNNNDSFLIITSNMPNSVNNNAPIIETSQGLSSSSSLPTNNQAQPSVVQAPSSIVTSSDFCYEPSRIIENNNSNNSNVSNIICSHNYSPMNNSIPSKNSLLWNSRTDHDAEDFRVQTLEEGQGMQHSLHAADDDDDDEIREANNIIEMNTNASLEGSNNDNNNNNNFDFGLLESVLNSEFMSHDINYMDELAWNF 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g01916 338 CDD SANT 68 108 IPR001005 -
Arst7g01916 338 MobiDBLite consensus disorder prediction 171 193 - -
Arst7g01916 338 FunFam MYB transcription factor 5 65 - -
Arst7g01916 338 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Arst7g01916 338 Gene3D - 13 65 - -
Arst7g01916 338 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Arst7g01916 338 Gene3D - 68 115 - -
Arst7g01916 338 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
Arst7g01916 338 CDD SANT 16 60 IPR001005 -
Arst7g01916 338 SMART sant 12 62 IPR001005 -
Arst7g01916 338 SMART sant 65 113 IPR001005 -
Arst7g01916 338 FunFam Transcription factor MYB86 67 144 - -
Arst7g01916 338 SUPERFAMILY Homeodomain-like 10 107 IPR009057 -
Arst7g01916 338 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 60 IPR017930 -
Arst7g01916 338 Pfam Myb-like DNA-binding domain 66 109 IPR001005 -
Arst7g01916 338 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Arst7g01916 338 PANTHER MYB DOMAIN PROTEIN 55 1 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g01916 Arst-Chr7 30892671 30895063 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g01916 1 133 MYB Transcription Factor Family AT3G12720 87.970 4.44e-89 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Arst7g01916 Myb_DNA-binding 1.3e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g01916 K09422 - gmx:100811532 355.525