Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g01913 ATGGCTCCAATGAGTCTCCCACCTGGTTTTAGGTTTCACCCCACAGATGAAGAGCTCGTTGCTTACTACTTAGAAAGGAAGATAACAGGTCGCTCTATAGAGCTTGACGTAATAGCTGAAGTTGATTTATACAAATGTGAACCATGGGATTTGCCAGATAAGTCATTTCTACCAAGCAAGGATATGGAGTGGTATTTCTACAGTCCAAGGGATAGGAAGTATCCAAATGGATCAAGAACGAACAGGGCAACAAGAGGCGGGTACTGGAAAGCGACTGGAAAGGACAGGGCAGTGCAGTCTCAGAAGAAGGCAGTTGGTATGAAGAAGACTTTGGTGTATTACAAAGGAAGAGCTCCACATGGAATTAGAACCAACTGGGTCATGCATGAGTACCGCTTGATTGAATCCCTCCCTGGAACTCCTCACTCCTCTTTCAAGGATTCCTTTTCATTGTGTCGGATTTTCAAAAAGACAATTCAAGTTCAAGACAAATCTAAAGAAGAGAAAGAACATCAAGCATTACTAGAGGAAGATCACTCAAGTGGCATTGAGATTTCAAGAGAAATGGAAGCCATGAATGATAATAATAACAATAATATAACTCTAAATAGTAATGAACAATATCCTAATAATAATAATAATAAACTCCCTAATTGTGATGCTTCATCTTCTGATCTCACTCAAGGAACATGTACACCCACAGAAACCGGTATAGCAGATGATTTTCATGCCCAATTTGCTTGTGATGAAGCAAATAGTGCCGCTAATTCTTACTCAATGGGAATAGCATACCCCTCAAACGTTTTTCAGGACATAGAGATGTCCATGTATGGAAGCATGCATAATTATCAATTCCCACAAACGCCTTTGGTGATGGAAGATTTTCCACAAATAGATTTTGCTGAGACAAAGTCATTGAAGCCAGAGGTGACTGAAGACTGCATGTTCTATGATAGATACGGTAGGGATTGTATGAATGGAACACTAGAAGAAATCATCTCATTGTGTTCCTCTCAAGACAACTCTGTGGCTTTGCCCATGCTAGAATGA 1050 0.4019 MAPMSLPPGFRFHPTDEELVAYYLERKITGRSIELDVIAEVDLYKCEPWDLPDKSFLPSKDMEWYFYSPRDRKYPNGSRTNRATRGGYWKATGKDRAVQSQKKAVGMKKTLVYYKGRAPHGIRTNWVMHEYRLIESLPGTPHSSFKDSFSLCRIFKKTIQVQDKSKEEKEHQALLEEDHSSGIEISREMEAMNDNNNNNITLNSNEQYPNNNNNKLPNCDASSSDLTQGTCTPTETGIADDFHAQFACDEANSAANSYSMGIAYPSNVFQDIEMSMYGSMHNYQFPQTPLVMEDFPQIDFAETKSLKPEVTEDCMFYDRYGRDCMNGTLEEIISLCSSQDNSVALPMLE 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g01913 349 SUPERFAMILY NAC domain 3 157 IPR036093 GO:0003677|GO:0006355
Arst7g01913 349 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 217 - -
Arst7g01913 349 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Arst7g01913 349 ProSiteProfiles NAC domain profile. 6 157 IPR003441 GO:0003677|GO:0006355
Arst7g01913 349 Gene3D NAC domain 15 161 IPR036093 GO:0003677|GO:0006355
Arst7g01913 349 FunFam Nac domain-containing protein 86 15 160 - -
Arst7g01913 349 MobiDBLite consensus disorder prediction 194 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g01913 Arst-Chr7 30513154 30517107 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g01913 1 334 NAC Transcription Factor Family AT1G54330 51.045 1.56e-98 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Arst7g01913 NAM 5.7e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g01913 - - aip:107611200 662.144