Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g01893 ATGCACATTCTAAGTTATTACTCATCACAACAAGGCAATAATAATAATAATACAATGCAATCCTCATCCTCTATGGAAAACAATGATTTGGAGAACAACAATAGCAATAAGGAAGTTTCAAACAACATCAATGGTAGTGGTAGTGGTATTTTTGCAAAGACACCATCAATGGTGGTGAGAAAGAAGTCATCGTCAGAAGATTCAATTATTGTCACAAACAATAGCAATGGTCGAATGGAAATGCTTAGGAATTTCGTGACAAATTTGAGAGAGGTCATTCTTGGAACTAAGCTTGCTGTGCTTTTTCCGGCAGTGCCTTTGGCTGTTGCTGCAGATTTGTATAGCTTTGGAAGGCCGTGGATTTTTGCATTAAGCTTAATCGGACTTGCCCCGCTAGCAGAACGTGTCAGCTTCCTCACTGAGCAAATTGCCTACTACACTGGTCCAACAGTTGGAGGGCTTCTGAATGCTACATGTGGAAATGCAACGGAGATGATAATTGCATTATTAGCACTGCGCAAGAACAAAGTGGATGTTGTCAAGTTCTCCCTTTTGGGTTCCATTCTCTCCAACCTTCTTTTGGTTCTTGGTAGTTCACTCCTTTGTGGTGGCTTGGCCAACCTTAAGAGGGAGCAAAGATATGACAGGAAACAAGCAGATGTGAACTCACTGCTATTGTTGCTGGGGTTGCTGTGCCATTTGCTGCCATTACTGTTCAAATACGCATTAGCAGGGGGAAGTTATTCAATTGCCACTTCTACCCTTCAGTTGTCAAGAGCAAGCAGTGTTGTCATGCTAATTGCATATCTTGCATATATTGTTTTCCAGTTAAAAACTCATCGAGTAATATTTGATGCACAAGAGGAAGAAGATGATGAAGAAAAGGCCGTTTTAGGATTTTGGAGTTCATTTTCATGGTTGGTTATTATGACATTGGTCATATCTGTGCTATCCGAATATGTTGTGGGAACCATTGAGGCTGCTTCAGATTCTTGGGGCATTTCGGTTAGCTTCATTAGCCTAATCTTGCTTCCAATTGTTGGGAACGCTGCTGAACATGCTGGTGCAATCATATTTGCTTTTAAGAACAAGTTGGACATATCTTTGGGCGTTGCCATGGGATCGGCAACTCAAATTTCCATGTTTGTGGTTCCATTAAGTGTGATTGTTGCATGGATAATGGGCATTCGAATGGATCTGGACTTCAATCTTCTTGACACAGGGTGTCTTGCTTTGGCAATTCTTGTTACGGCATTTACTTTACAGGATGGAACTTCACATTACTTGAAGGGAGTTGTTCTTACCCTATGTTACATTGTAATTGCTGCGTGCTTTTTTGTTCTCAAAACTCCATTTACCGACGACCCTGACATCGAAACTAAAACATCCTATCATGCTGTGGCCTAA 1407 0.4108 MHILSYYSSQQGNNNNNTMQSSSSMENNDLENNNSNKEVSNNINGSGSGIFAKTPSMVVRKKSSSEDSIIVTNNSNGRMEMLRNFVTNLREVILGTKLAVLFPAVPLAVAADLYSFGRPWIFALSLIGLAPLAERVSFLTEQIAYYTGPTVGGLLNATCGNATEMIIALLALRKNKVDVVKFSLLGSILSNLLLVLGSSLLCGGLANLKREQRYDRKQADVNSLLLLLGLLCHLLPLLFKYALAGGSYSIATSTLQLSRASSVVMLIAYLAYIVFQLKTHRVIFDAQEEEDDEEKAVLGFWSSFSWLVIMTLVISVLSEYVVGTIEAASDSWGISVSFISLILLPIVGNAAEHAGAIIFAFKNKLDISLGVAMGSATQISMFVVPLSVIVAWIMGIRMDLDFNLLDTGCLALAILVTAFTLQDGTSHYLKGVVLTLCYIVIAACFFVLKTPFTDDPDIETKTSYHAVA 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g01893 468 FunFam Vacuolar cation/proton exchanger 293 447 - -
Arst7g01893 468 Pfam Sodium/calcium exchanger protein 303 444 IPR004837 GO:0016020|GO:0055085
Arst7g01893 468 Pfam Sodium/calcium exchanger protein 120 277 IPR004837 GO:0016020|GO:0055085
Arst7g01893 468 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 35 449 IPR004713 GO:0006812|GO:0008324|GO:0016020
Arst7g01893 468 MobiDBLite consensus disorder prediction 1 48 - -
Arst7g01893 468 NCBIfam calcium/proton exchanger 84 446 - -
Arst7g01893 468 NCBIfam calcium/proton exchanger 103 446 IPR004798 GO:0006816|GO:0015369
Arst7g01893 468 Gene3D - 296 447 IPR044880 -
Arst7g01893 468 Gene3D - 149 295 IPR044880 -
Arst7g01893 468 FunFam Vacuolar cation/proton exchanger 149 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g01893 Arst-Chr7 29391496 29396163 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g01893 82 454 Antiporters AT2G38170 69.816 0.0 522
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g01893 K07300 - gmx:100802344 603.979