Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g01853 ATGGGCGTGGGAGAGACCACAAAACTCGAACCTGAACCCGAACCCGAACCGAAAGATGTTCACCGCCACCAAGAAGAGGAAGAAGAAGACGACGACGACGTGGAAGAAGAAGACGAAGGCTTGTCCGACACAAGAACAGCGATAGCATTGGGTCTGTCAGCGAAGGGGAAAGGGCAGAGGCAGAGGCAGCAGCAGCAGGAGTGCGCGGTGGTCCAGCAGGTGTCGGACAAGCTGGTGAGCGGCAGCCTTCAGTGGAAGATAGAAGCAGCCAGAGAGATCCGTAAGCTCGTCAGGAAATCGCCTTCGTCCTCTAAGACGAGGTCCAGGCTGGGCGCGGCTGGAGTGGTCCAGCCTCTCGTCTTCATGCTGTCGTCATCCAACCCCGATGCCCGTTACTCCTCCCTCCTCGCTCTCCTCAACCTCGCCGTCCGCAACGAACGAAACAAGGTCAAAATAGTGACAGCTGGTGCTATCCCTCCTCTGGTGGAACTCCTCAAAACGCAAAATAGTAGTATAAGGGAATTAGCGACAGCGGCAATCTTGTCACTCTCAGCTGCAGCTCCCAATAAGCCCATAATTGTTGCTTCTGGAGCTGCGCCTCTGCTTGTTAAGATCCTCAACTCTGGAAGTGTTCAAGGCAGAGTTGATGCCGTTACAGCCCTCTATAATCTCTCCACCATCATCAAGAAGAATTCTACTGAACTCCTTAATGCTAGTGCTGTTTCTCCTCTCATCAACCTCCTTAAAGAGTGCAAGAAATACTCCAAGTTTGCCGAGAAAGCTACTGCGCTACTCGAAATTCTCTCCAACTTTGAAGAGGGACGAACCGCAATCTCAGTTGCAGATGGCGGGATTTTAACCTTAGTAGAGACAGTTGAAGATGGATCACTAGTCAGCACACAACATGCTGTTGGAGCTCTGCTGTCATTGTGTCTAAGCTGCCGAGACAAATACCGGGAACTTATCCTCAAAGAAGGAGCAATCCCAGGTTTGTTACGGCTTACAGTGGAGGGCACATCAGAAGCACAAGATAGAGCACGTGTGCTTCTGGATTTGCTTAGAGATTCTCCCCCGGAAAGAAGACTAGCCTCCTCGGTTTTGGAGAAAATTGTTTATGACATCGCTGAACGCGTAGATGGAGCAGACAAAGCTGCTGAAACAGCTAAAAGGTTATTACAAGACATGGTTCAGAGGAGTATGGAACAAAGCTTGAACTGCATTCAGCATAGAGCAGCATCTTGTAATCCTTCTGTGATTCCTTCCACTTGA 1269 0.502 MGVGETTKLEPEPEPEPKDVHRHQEEEEEDDDDVEEEDEGLSDTRTAIALGLSAKGKGQRQRQQQQECAVVQQVSDKLVSGSLQWKIEAAREIRKLVRKSPSSSKTRSRLGAAGVVQPLVFMLSSSNPDARYSSLLALLNLAVRNERNKVKIVTAGAIPPLVELLKTQNSSIRELATAAILSLSAAAPNKPIIVASGAAPLLVKILNSGSVQGRVDAVTALYNLSTIIKKNSTELLNASAVSPLINLLKECKKYSKFAEKATALLEILSNFEEGRTAISVADGGILTLVETVEDGSLVSTQHAVGALLSLCLSCRDKYRELILKEGAIPGLLRLTVEGTSEAQDRARVLLDLLRDSPPERRLASSVLEKIVYDIAERVDGADKAAETAKRLLQDMVQRSMEQSLNCIQHRAASCNPSVIPST 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g01853 422 Gene3D - 70 196 IPR011989 -
Arst7g01853 422 FunFam U-box domain-containing protein 4 57 413 - -
Arst7g01853 422 MobiDBLite consensus disorder prediction 9 25 - -
Arst7g01853 422 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 156 198 IPR000225 GO:0005515
Arst7g01853 422 SUPERFAMILY ARM repeat 72 407 IPR016024 -
Arst7g01853 422 SMART arm_5 144 185 IPR000225 GO:0005515
Arst7g01853 422 SMART arm_5 186 226 IPR000225 GO:0005515
Arst7g01853 422 SMART arm_5 271 312 IPR000225 GO:0005515
Arst7g01853 422 SMART arm_5 103 143 IPR000225 GO:0005515
Arst7g01853 422 SMART arm_5 228 270 IPR000225 GO:0005515
Arst7g01853 422 Gene3D - 197 405 IPR011989 -
Arst7g01853 422 Pfam Armadillo/beta-catenin-like repeat 188 225 IPR000225 GO:0005515
Arst7g01853 422 Pfam Armadillo/beta-catenin-like repeat 145 184 IPR000225 GO:0005515
Arst7g01853 422 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 239 283 IPR000225 GO:0005515
Arst7g01853 422 MobiDBLite consensus disorder prediction 26 40 - -
Arst7g01853 422 MobiDBLite consensus disorder prediction 1 46 - -
Arst7g01853 422 PANTHER U BOX DOMAIN-CONTAINING 30 355 - -
Arst7g01853 422 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 114 156 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g01853 Arst-Chr7 27227609 27230718 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g01853 76 360 U-box Gene Family AT3G54790 40.210 2.74e-40 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g01853 K08332 - gmx:100782472 528.865