Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g01738 ATGCAAACACAAAACAAGTCATCTAACTCACTGAGTCAACTCGCTCAGAGCATGTTCTCATCCAACAACACCATCATGCTTGTCGCCATTGTTTCTCTTCTCCTTGTAATTCTCTTCGTCCTTCTCCTCCATCTCTACGCCAAATGCTTCCTCTCTCACTCTCACCCACCACCTCAACAACCTCCCCGCCGTCGCCGTCGCCGCCGCCATCGCCACCGTGCAACTCTCCCTGCCTTCCAGGGTCCACCCCAGTTCCAGTTCCACCACTTGCTCGTGGAGGACTCACCCTTTGCCACCAAAGGACTCGATTCCGCTACGGTTTCAGCGATTCCCGTGTTTGTGTACGAAGCAGAGAAGAAGAGGAAAACAGAGCAAGAAGAAGACAGAGAGGAATTAGAATGTGTGATTTGTTTGAGCGGTTTCGAAGAAGGTGAAATGGGAAGAACATTACCAAAATGTGGACACGCTTTTCACGTGGAATGCATTGATATGTGGCTGAGTTCTCATTGTAACTGTCCCATTTGTAGAGCTCCTGTTGTTCATCAGAATGATACGGGTTCTGTTGATGATGAAGATGATGATGGTGTGGTTCAGATTGTTATTGGTACTCCGAGTTATGAGATTAGTGAGAGTGAGAATGGGAACAATGATGAGGATAATAATTCAGTTTCAGTTTCAGGTTCAGAAACTTCATATTCTTCTTCTTCGTCCTCTTTGTTGTTGGGGTGTTCTTTCAAGAGAATGCTGAGAAAGAAATATTGA 762 0.4593 MQTQNKSSNSLSQLAQSMFSSNNTIMLVAIVSLLLVILFVLLLHLYAKCFLSHSHPPPQQPPRRRRRRRHRHRATLPAFQGPPQFQFHHLLVEDSPFATKGLDSATVSAIPVFVYEAEKKRKTEQEEDREELECVICLSGFEEGEMGRTLPKCGHAFHVECIDMWLSSHCNCPICRAPVVHQNDTGSVDDEDDDGVVQIVIGTPSYEISESENGNNDEDNNSVSVSGSETSYSSSSSSLLLGCSFKRMLRKKY 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g01738 253 ProSiteProfiles Zinc finger RING-type profile. 134 176 IPR001841 -
Arst7g01738 253 Coils Coil 115 135 - -
Arst7g01738 253 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 16 192 IPR044675 -
Arst7g01738 253 CDD RING-H2_EL5-like 134 176 - -
Arst7g01738 253 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 88 181 IPR013083 -
Arst7g01738 253 FunFam RING-H2 finger protein ATL1 89 181 - -
Arst7g01738 253 Pfam Ring finger domain 133 176 IPR001841 -
Arst7g01738 253 SMART ring_2 134 175 IPR001841 -
Arst7g01738 253 SUPERFAMILY RING/U-box 113 182 - -
Arst7g01738 253 MobiDBLite consensus disorder prediction 207 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g01738 Arst-Chr7 23097525 23098630 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g01738 19 224 Rapid Response to Elicitors AT3G16720 35.749 2.90e-28 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g01738 - - gmx:100777829 191.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst7g01738 7 23097525 23098630 Arst7g01738 7 23097525 23098630 ECH
Arst1g00604 1 5949037 5950334 Arst7g01738 7 23097525 23098630 PCT