Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g01590 ATGGACATATCTTTGTTAAATGTGCTCTCCAATGGCATATCCTCATTTTTGCATCCATCATTTTCTGGAAACATGAACTCAAAACCTGTATCAATGTATTGCCAAAGTGCAGAGCAGACACTTAAGTTGTTGAAGCCAATTATCGATACAAGTGTTCATTCTGATATATCTGCTGATGAAGAGCTTAGAAAGTTATTTGAGGAACTTGGTCAGTCTGTTGATGAGATGAGGGAGCTTTTCGAGAATTGGCATCCGCTATCCAGTAAAATTTACTTTGTGATGCAAGCTGAACCGTTGATAGCTAGAGTTCAGTCTATAGGGTTCAATATTTTGCAGAAGCTGAAGGCTTCACAGCAATGTCTACCTGATGATTTGGGGCATGATATGACATCAATCATTAAGGAAGCTATAAATGAACAACTGGAAGGCAAAGGACCAAGTTCTGAGATTCTAGCAAATATTGCTGAGATCCTCGACTTAAGGTCTAATCAAGATGTTTTGATTGAAGCTGTGGCCCTTGAAAGGTTGAAGGAGAATGCTGAACAAACTGAAAACATTGCAGAAGCTGAGTATATTGATCGAATGATCTCTGTTGTGACTCGAATGCATGAGCGAATCATCATTCTCAAGCAAGCTCAGAGCTCTATCCCGGATTCGGTACCTGCTGATTTTTGCTGTCCTCTCTCTTTGGAATTGATGACAGATCCAGTCATTGTGTCATCCGGGCAAACCTATGAGCGAACTTTCATCAAGGACTGGATTGATCTTGGGCTCATGGTTTGTCCAAAGACTCGTCAGACTCTGGTTCATTCCAACCTAATACCTAACTACACTGTAAAAGCATTAATTGTTAATTGGTGCGAAACAAACAATGTGATACTAGTTGATCCAGTAAAATCCACAAACATAAATCAACTATCTCTCCTTCATGGATCTATTGAGTCTGATTCAACCGAGGAATCAACTGTTAGAACTTCTTTCAGTGCAAACCACCAAGCGGAAACATCACTATTGCATCCTAGTTCAACTCCAGAAGATTCCTTTAGTGGCGTGGATAATGCACAGCATGTGGATCCTGTAAGAATATCATCTGCAGTTTCAGATGATAGGTCTGCTAGCTCGGACGAAGAAAGTGTGGATTTAGTTTCGCAATCATCAACTTCACCATCTAGAAGGGAAGCTTCAAATGCCTTGAGATCAGAGCAATCTCAAAACCATGTAAGAACTTATTCTGAGTCCAGTGAACACTCTAGTGAAAATTTTCATCAAGGCATACAGGGTGATAGCAACAATGGTCCTCTTCCATCATCAACCAGTCCAATCCACAGTCGAGATGCTTCTGAGGAATTAGCTCCCGAGCTGGATGCTGCTGCCAGGCCAATTCCACAAGGTGAGCCCGAGTTTTCACCACAACTGGTGCAGCCAAGGTTTCCAAGAAAAACTGTATTACAACGGCCGTCAGAGAGGTTTGTCCCTAGGATAGTTTCTTCTCCTCCTGTTGAACCAAGAGGCGATGGATCCGTTATTGAATCCAGGGTTAAGGAGTTGATTGAGCTCTTGAAGAGCTCTTCTCTTGATACTCAAAGGGAAGCCACAGGAGAACTCCGCCTTCTTGCCAAGCACAACATGGATAACAGAATTGTGATTGCAAACTGTGGAGCCATTCCCTTGTTGGTCAATTTGCTTCTATCAACCGATACAACAATCCAAGAAAACTCTGTTACAGCACTTCTTAACTTATCAATCAATGACAACAACAAAAATGCAATTGCAAATGCTGGTGCAATTGAACCTCTGATTCATGTCCTTGAGACAGGTAGTGAAGAAGCAAAGGAGAACTCGGCGGCTACTCTTTACAGCTTATCAGTGGTTGAGGAGAACAAGATCAGGATAGGGAGGGCCGGGGCTATTAAACCTCTGGTTGAGTTATTAAGTAATGGAACTCCAAGGGGTAAGAAAGATGCTTCCACTGCTTTATTTAACTTGTCAATATTTCACGAAAACAAGGATCGAATTGTAGAAGCTGGTGCTGTGAAGCACCTTGTAGATTTGATGGACCCTGCAGCCGGAATGGTCGATAAGGCTGTGGCTGTTCTAGCAAATCTGGCCACAATACCGGAAGGAAGAACTGCCATTGGGCAGCAAGGTGGCATTCCTCTTCTGGTTGAGGTTGTTGAGTTGGGTTCTACTAGAGGAAAGGAGAATGCAGCAGCAGCTCTTCTACATTTATGCGTAAACCATCCGAGATATTTAAACATGGTACTCCAAGAAGGAGCTGTTCCACCATTAGTAGCTTTATCAAGATCAGGCACCGCAAGGGCTAAAGAGAAGGCCCTGTCTCTTCTGAATCATTTTAGAGATCGAAGGCATGGTGGTGCTGTGAGGGGCTGA 2391 0.4287 MDISLLNVLSNGISSFLHPSFSGNMNSKPVSMYCQSAEQTLKLLKPIIDTSVHSDISADEELRKLFEELGQSVDEMRELFENWHPLSSKIYFVMQAEPLIARVQSIGFNILQKLKASQQCLPDDLGHDMTSIIKEAINEQLEGKGPSSEILANIAEILDLRSNQDVLIEAVALERLKENAEQTENIAEAEYIDRMISVVTRMHERIIILKQAQSSIPDSVPADFCCPLSLELMTDPVIVSSGQTYERTFIKDWIDLGLMVCPKTRQTLVHSNLIPNYTVKALIVNWCETNNVILVDPVKSTNINQLSLLHGSIESDSTEESTVRTSFSANHQAETSLLHPSSTPEDSFSGVDNAQHVDPVRISSAVSDDRSASSDEESVDLVSQSSTSPSRREASNALRSEQSQNHVRTYSESSEHSSENFHQGIQGDSNNGPLPSSTSPIHSRDASEELAPELDAAARPIPQGEPEFSPQLVQPRFPRKTVLQRPSERFVPRIVSSPPVEPRGDGSVIESRVKELIELLKSSSLDTQREATGELRLLAKHNMDNRIVIANCGAIPLLVNLLLSTDTTIQENSVTALLNLSINDNNKNAIANAGAIEPLIHVLETGSEEAKENSAATLYSLSVVEENKIRIGRAGAIKPLVELLSNGTPRGKKDASTALFNLSIFHENKDRIVEAGAVKHLVDLMDPAAGMVDKAVAVLANLATIPEGRTAIGQQGGIPLLVEVVELGSTRGKENAAAALLHLCVNHPRYLNMVLQEGAVPPLVALSRSGTARAKEKALSLLNHFRDRRHGGAVRG 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g01590 796 ProSiteProfiles U-box domain profile. 219 293 IPR003613 GO:0004842|GO:0016567
Arst7g01590 796 FunFam RING-type E3 ubiquitin transferase 497 791 - -
Arst7g01590 796 Pfam Armadillo/beta-catenin-like repeat 626 663 IPR000225 GO:0005515
Arst7g01590 796 Pfam Armadillo/beta-catenin-like repeat 583 622 IPR000225 GO:0005515
Arst7g01590 796 Pfam Armadillo/beta-catenin-like repeat 544 581 IPR000225 GO:0005515
Arst7g01590 796 Pfam Armadillo/beta-catenin-like repeat 667 703 IPR000225 GO:0005515
Arst7g01590 796 MobiDBLite consensus disorder prediction 377 444 - -
Arst7g01590 796 SMART arm_5 665 704 IPR000225 GO:0005515
Arst7g01590 796 SMART arm_5 624 664 IPR000225 GO:0005515
Arst7g01590 796 SMART arm_5 746 787 IPR000225 GO:0005515
Arst7g01590 796 SMART arm_5 501 540 IPR000225 GO:0005515
Arst7g01590 796 SMART arm_5 583 623 IPR000225 GO:0005515
Arst7g01590 796 SMART arm_5 705 745 IPR000225 GO:0005515
Arst7g01590 796 SMART arm_5 542 582 IPR000225 GO:0005515
Arst7g01590 796 PANTHER U BOX DOMAIN-CONTAINING 31 786 - -
Arst7g01590 796 Coils Coil 163 193 - -
Arst7g01590 796 FunFam RING-type E3 ubiquitin transferase 219 294 - -
Arst7g01590 796 SUPERFAMILY ARM repeat 513 785 IPR016024 -
Arst7g01590 796 CDD RING-Ubox_PUB 221 273 IPR045210 -
Arst7g01590 796 SMART Ubox_2 223 286 IPR003613 GO:0004842|GO:0016567
Arst7g01590 796 Pfam U-box domain 220 290 IPR003613 GO:0004842|GO:0016567
Arst7g01590 796 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 219 295 IPR013083 -
Arst7g01590 796 MobiDBLite consensus disorder prediction 314 449 - -
Arst7g01590 796 SUPERFAMILY RING/U-box 210 297 - -
Arst7g01590 796 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 511 553 IPR000225 GO:0005515
Arst7g01590 796 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 553 595 IPR000225 GO:0005515
Arst7g01590 796 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 594 636 IPR000225 GO:0005515
Arst7g01590 796 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 635 677 IPR000225 GO:0005515
Arst7g01590 796 MobiDBLite consensus disorder prediction 314 350 - -
Arst7g01590 796 Gene3D - 505 791 IPR011989 -
Arst7g01590 796 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 676 717 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g01590 Arst-Chr7 18468960 18472658 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g01590 180 796 U-box Gene Family AT2G23140 59.752 0.0 686
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g01590 - - adu:107458158 1496.49