Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g01588 ATGTTTGGATGTCCTGAGACAGATGAGATAGCAAAGAAGGTGAAGAAAGAGGGAGAATTATTATTATCATCAAGTTGTAGTGAAAGTGAAATAGAAAGAATGGGGAGGAAGCAAAGCTTAAACACAGTGACACCATGTGCTGCTTGCAAGCTTCTTAGAAGAAGGTGTGCTGAGGAGTGTCCCTTCTCTCCTTATTTCTCACCACATGAGCCTCAAAAGTTTGCTGCTGTTCATAAAGTCTTTGGTGCAAGCAATGTCTCCAAGATGCTCATGGAAGTAGGAGAGGGGCAAAGAGCAGATGCAGCAAACAGTTTGGTATATGAAGCAAACTTGAGATTAAGAGATCCGGTTTATGGATGCATGGGTGCAATTTCAGGTTTGCAGCAACAAATTCAAACATTGCAAGCGGAAGTCAATGCTGTTAGGGCTGAGATTCTCAAATACAAATATAGAGAAGCTGCTGCCACTGCCACTGCCACTCTCATTTCCATGAATCATCATCATCATCTTCCATCTAATAATAATAATAATCAAGCACCAATTATAATCAATAATAATAATGATAATAATGCTGCAAACTCTTCATCACAACAACAAGGTATTTCTCAACCTCCTCCTCTTCCTCCTCCGCCTTTGCGCCCTGCGCCGCCAAATCCATCTTTACCTTCACCTTCTACTGTTGTGCTTTCTTCATCTTTGTCTTCGTCTTCGGCTTCTTCTGTTTACAACAACACTCCACCTAAAACCACATTGAGTCATGGATCCATTACTAGTGAAAGTGTTCCTTACTTTGCTTAA 798 0.4098 MFGCPETDEIAKKVKKEGELLLSSSCSESEIERMGRKQSLNTVTPCAACKLLRRRCAEECPFSPYFSPHEPQKFAAVHKVFGASNVSKMLMEVGEGQRADAANSLVYEANLRLRDPVYGCMGAISGLQQQIQTLQAEVNAVRAEILKYKYREAAATATATLISMNHHHHLPSNNNNNQAPIIINNNNDNNAANSSSQQQGISQPPPLPPPPLRPAPPNPSLPSPSTVVLSSSLSSSSASSVYNNTPPKTTLSHGSITSESVPYFA 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g01588 265 Pfam Lateral organ boundaries (LOB) domain 45 141 IPR004883 -
Arst7g01588 265 MobiDBLite consensus disorder prediction 224 259 - -
Arst7g01588 265 MobiDBLite consensus disorder prediction 202 223 - -
Arst7g01588 265 Coils Coil 124 151 - -
Arst7g01588 265 ProSiteProfiles LOB domain profile. 44 145 IPR004883 -
Arst7g01588 265 MobiDBLite consensus disorder prediction 168 265 - -
Arst7g01588 265 MobiDBLite consensus disorder prediction 168 201 - -
Arst7g01588 265 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 41 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g01588 Arst-Chr7 18399225 18401204 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g01588 3 153 AS2 family AT2G30340 68.831 4.86e-72 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Arst7g01588 LOB 2.3e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g01588 - - adu:107458169 320.857