Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g01587 ATGGGGAGGAAGCAAAGCTTAAACACAGTGACACCATGTGCTGCTTGCAAGCTTCTTAGAAGAAGGTGTGCTGAGGAGTGTCCCTTCTCTCCTTATTTCTCACCACATGAGCCTCAAAAGTTTGCTGCTGTTCATAAAGTCTTTGGTGCAAGCAATGTCTCCAAGATGCTCATGGAAGTAGGAGAGGGGCAAAGAGCAGATGCAGCAAACAGTTTGGTATATGAAGCAAACTTGAGATTAAGAGATCCGGTTTATGGATGCATGGGTGCAATTTCAGGTTTGCAGCAACAAATTCAAACATTGCAAGCGGAAGTCAATGCTGTTAGGGCTGAGATTCTCAAATACAAATATAGAGAAGCTGCTGCCACTGCCACTGCCACTCTCATTTCCATGAATCATCATCATCATCTTCCATCTAATAATAATAATAATCAAGCACCAATTATAATCAATAATAATAATGATAATAATGCTGCAAACTCTTCATCACAACAACAAGGTATTTCTCAACCTCCTCCTCTTCCTCCTCCGCCTTTGCGCCCTGCGCCGCCAAATCCATCTTTACCTTCACCTTCTACTGTTGTGCTTTCTTCATCTTTGTCTTCGTCTTCGGCTTCTTCTGTTTACAACAACACTCCACCTAAAACCACATTGAGTCATGGATCCATTACTAGTGAAAGTGTTCCTTACTTTGCTTAA 699 0.4192 MGRKQSLNTVTPCAACKLLRRRCAEECPFSPYFSPHEPQKFAAVHKVFGASNVSKMLMEVGEGQRADAANSLVYEANLRLRDPVYGCMGAISGLQQQIQTLQAEVNAVRAEILKYKYREAAATATATLISMNHHHHLPSNNNNNQAPIIINNNNDNNAANSSSQQQGISQPPPLPPPPLRPAPPNPSLPSPSTVVLSSSLSSSSASSVYNNTPPKTTLSHGSITSESVPYFA 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g01587 232 MobiDBLite consensus disorder prediction 135 168 - -
Arst7g01587 232 MobiDBLite consensus disorder prediction 135 232 - -
Arst7g01587 232 ProSiteProfiles LOB domain profile. 11 112 IPR004883 -
Arst7g01587 232 Pfam Lateral organ boundaries (LOB) domain 12 108 IPR004883 -
Arst7g01587 232 MobiDBLite consensus disorder prediction 191 226 - -
Arst7g01587 232 Coils Coil 91 118 - -
Arst7g01587 232 MobiDBLite consensus disorder prediction 169 190 - -
Arst7g01587 232 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 8 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g01587 Arst-Chr7 18399225 18401204 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g01587 6 120 AS2 family AT2G30340 84.348 1.95e-71 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Arst7g01587 LOB 1.7e-39 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst7g01587 7 18399225 18401204 Arst7g01587 7 18399225 18401204 ECH