Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g01539 ATGTCCGTACAGTCAACACTGAAGCTGGAGAAGTTGAACTTGAAGCTCTCGCCTTCAAGCTCAAATTTTGAGGGTGACCCACCAAGTAAGACTAGGCGCAAAACGAAACAGAGGTTGGTTCGGATCATCCTCACTGACCACGACGCTACCGATTCCGATTCTTCAAGCGACGAAGCACAACGAAACAACACACACAAACTCAAAAGAGAGATCACGCAAATAACCATGCACCTTCCCTCACCATATTCCTCTACTACTACTTCCCCTTCTCCTTCTTCTTCTTCTTCTTCAACTTCATCTTCTATCTTTGGTTCCGTCTCTTCTGATTCATTGCAACGGAGAACCAAATCATGCAAGAGACCCAAGAAACCGCAACTTCAACCGCCGGAGCGCCATCGCAACAGGTTCCGCGGTGTGAGACAGCGGCCGTGGGGACGGTGGGCTGCCGAGATCCGTGACCCGACCCAACGAAAACGGGTCTGGCTTGGAACCTTTGACACGGCGGAGGAGGCCGCCACCGAGTACGACCGTGCGGCGGTGAAGCTCAAGGGTCCAAACGCCGTTACGAACTTTCCGGTTAACTCTTCGGCGGGTATTACGGCGGTTGATAACGGTGTAGCGGCGTTTTCCGATGCGGTCGCGCTTTCTCCAACTTCTGTTTTGCCTTACGACGGTGACTCGACGCCGTTTGACGGTTTCCGTTACGTGGACGCTTTTGGCTTCGACATCGCCGATGAGGCGCCGTTAAGTTTGACGGACGTCGACGTTAGCAGCGTTATGCTGACGTGTCAGCGTCTTGATGCAAAAGAGGATGAAGCGTTCGGCGAGTTTGACCTCGACGAGTTCATTACGTGGCCGTACTAA 864 0.5289 MSVQSTLKLEKLNLKLSPSSSNFEGDPPSKTRRKTKQRLVRIILTDHDATDSDSSSDEAQRNNTHKLKREITQITMHLPSPYSSTTTSPSPSSSSSSTSSSIFGSVSSDSLQRRTKSCKRPKKPQLQPPERHRNRFRGVRQRPWGRWAAEIRDPTQRKRVWLGTFDTAEEAATEYDRAAVKLKGPNAVTNFPVNSSAGITAVDNGVAAFSDAVALSPTSVLPYDGDSTPFDGFRYVDAFGFDIADEAPLSLTDVDVSSVMLTCQRLDAKEDEAFGEFDLDEFITWPY 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g01539 287 FunFam Ethylene-responsive transcription factor 2 134 194 - -
Arst7g01539 287 ProSiteProfiles AP2/ERF domain profile. 135 192 IPR001471 GO:0003700|GO:0006355
Arst7g01539 287 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 36 203 - -
Arst7g01539 287 SUPERFAMILY DNA-binding domain 135 194 IPR016177 GO:0003677
Arst7g01539 287 Pfam AP2 domain 135 184 IPR001471 GO:0003700|GO:0006355
Arst7g01539 287 Gene3D AP2/ERF domain 134 194 IPR036955 GO:0003700|GO:0006355
Arst7g01539 287 SMART rav1_2 135 198 IPR001471 GO:0003700|GO:0006355
Arst7g01539 287 PIRSF PTI6 9 287 IPR017392 GO:0003700
Arst7g01539 287 CDD AP2 135 194 IPR001471 GO:0003700|GO:0006355
Arst7g01539 287 MobiDBLite consensus disorder prediction 1 140 - -
Arst7g01539 287 MobiDBLite consensus disorder prediction 1 26 - -
Arst7g01539 287 MobiDBLite consensus disorder prediction 27 72 - -
Arst7g01539 287 MobiDBLite consensus disorder prediction 76 112 - -
Arst7g01539 287 PRINTS Ethylene responsive element binding protein signature 158 174 IPR001471 GO:0003700|GO:0006355
Arst7g01539 287 PRINTS Ethylene responsive element binding protein signature 136 147 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g01539 Arst-Chr7 16927063 16928788 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g01539 30 223 AP2-EREBP Transcription Factor Family AT4G27950 40.976 5.67e-34 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Arst7g01539 AP2 1.1e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g01539 K13434 - gmx:100817278 281.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst7g01539 7 16927063 16928788 Arst7g01539 7 16927063 16928788 ECH
Arst1g00756 1 7717568 7719203 Arst7g01539 7 16927063 16928788 PCT