LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst7g01531	ATGAATCTTTCAAAGTGTGAAGTTGTTCTGTTCTTGTGGTTTTGCTGCTATTTGCTATTGGCTACTGCTCAGAATGGAGTCACTCACCCCAATGAAGTTAAGGCGTTGAGAGCCATAAAGAACAATTTGATTGATGTCAATAGAAATTTGAGTAATTGGAATCAAGGAGATCCATGTATTAATAGATGGACAGGGGTTTTGTGTCACGACAGAAGATTTAACGATGGATATTTTCATGTTCGGGAACTGCAACTATTGAGAATGAACTTGTCTGGAAAATTGGCACCGGAGATTGGCAACTTCACTTATCTGGAAATATTGGATTTTATGTGGAACAAGATAAGTGGGACCATACCAAAAGAAATTGGCAACATCATTACCCTGAAACTCTTGCTCCTGAATGGAAATAAATTAATTGGTCCACTGCCAGAAGAGCTTGGCTATTTACCAAACTTGATCCGAATGCAAATTGATCAGAACAATATCAATGGATCTATACCTTCATCATTTGCAAACCTCAATGCCTGCAAGCACTTTCACATGAACAATAATTCACTTAGCGGCCCTATCCCGCCGGAGCTTTCCCAACTACCAAACCTTTTTCACCTGCTTCTTGACACAAACAACTTAACAGGAACACTTCCCCCTGATCTCTCTAAGATGCCACGCTTAAAGATTCTGCAGCTTGATAACAATAACTTTAGTGGAAGTACTATTCCCGAGTCTTATGGAGATATGTCACGTTTGTTCAAACTGAGCCTTAGGAACTGCAACTTGAAAGGACCAATTCCTGATTTGAGTAGGATACCAAACCTTTATTATATTGATCTCAGTCACAATCAGCTGAATGAAACAATTCCTACAAATCAGCTTTCTGGGAATATCACAACCATTGTGTTATCAAACAACAATCTCAGTGGAACTATTCCATTAAATTTTTCAAATCTTCCACGTCTTAAGAAATTATCAATTGCAAACAATAAATTGAGTGGCAACGTTCCCTCCTCCATTTGGCAGAACAAGACTTCAAGTGCAAATGAAAGCCTTATTGTGGACTTGCAAAACAATGAGCTCAACACCATATCAGGAAGTACTACTCTTCCTTCAAATGTCACACTCCAGCTTGGGGGAAATCCTCTATGCAAAAATAACAGCTTTGCTAAGTTCTGTGGATCTCAAGGTGTAACCGGGGGGAATGGTAGCTCCGGCATTAACTGTCCCGGTGAACCATGCTCCTCTCCTTATGAGTACTCTGTGGACTGTGTCTGTTCAGCTCCATTGTATGTTGATTACAGATTGAAAAGTCCAGGATTTGGATCAGATTTCCCTGCATTCATGAGTAACTTTCAAACATACCTCACTGATGGATTGAAAGTTGAGACTAATCAGCTGCACATTACTGATTATGAATGGGAAGAAGGGCCTCGGTTGCGAATGAACTTGAAGGTTTTTCCTGCAACTGTTAACAACACCACAACTAATCAGAAGTTCAATGATAGCGAGTATTCGCGGATTAGAAGCACGTTGACAGGGTGGAATATTAGTGACAGTGACTTGTTTGGGCCTTATGAACTTATGGATCTTCCTGCTTATAGTCAGGTGATTGTGGTGTCTTCAGGTTCAGGGCTAAGCAAAGGTGCACTGGCTGGAATAATCTTAGGTTCAATTGCGGTAGCAGTTACATTATCTGCAATTGTTTCCCTTCTTATATTGAGAATCAGATTGAGAGATTACCGTATACTTTCCAAACGGCAACATGGTGGAACAAGGATCTCAATAAAAATTGAAGGTGTGAGGGTATTTGTTTTTGAAGAGTTGGCAGCAGCAACTAATAATTTCAGTGAGTCTTCTCAAGTTGGACGCGGCGGGTATGGGAAGGTTTATAAAGGTATTCTTGCTGACGGCACTGCTGTCGCCATAAAACGTGCACAGGAAGGATCACTGCAAGGTGAGAGGGAGTTTCTTACAGAAATACAGTTGCTGTCGCGCCTGCATCACCGAAACCTTGTGTCTCTAATTGGATATTGTGATGAAGAGGGTGAACAGATGCTGGTTTACGAATATATGCCGAACGGAACGCTAAGGGATCACCTCTCGCCTTATTCAAGAACACCTCTGAATTTTACAATGAGAATGAAGATTGCTCTAGGATCAGCTAAAGGTCTTTTGTATCTACACACAGAAGCTGATCCTCCAATATTCCACAGAGATGTCAAGGCCAGTAATATACTATTGGACTCTAAGTTCAATGCAAAGGTTGCTGATTTTGGACTTTCGCGACTCGCCCCGGTGCCAGATGTCGAAGGAGTTGTGCCTGGTCATGTATCTACAGTGGTAAAAGGGACCCCGGGTTACCTTGATCCGGAGTATTTCTTAACTCGCAAGTTAACAGACAAGAGTGATGTTTATAGTCTTGGTGTCGTGTTTCTGGAAATTGCAACCGGAAGGGCACCAATCTCCCATGGCAAAAACATTATAAGACAGGTTACTTCGGATTACCAATCCGGCGGTCTAGTTGCAGTTATGGATGAACGCTTGGGGCCTTGTCCTTCAGAATGTGTGCAACCATTTTTGACATTGGCTCTAAAGTGTTGCGAAGACGTGCCAGACGATAGGCCTAAGATGGCAGAAGTGGTTAGAGAGCTTGAAAACATTTGGTCCATGATTCCTGAGTCTAATGGCAAAGTAGCTGAATATGTTAGCAGTGATTCAGGAACATTATTCAGTTCACAACCTTCATCATCCATCCCTTTTGCATCCGTAGAAATTTCTGGCAGTGATCTTATTAGTGGAGATATTCCAACCATCAAGCCAAGATAA	2820	0.4163	MNLSKCEVVLFLWFCCYLLLATAQNGVTHPNEVKALRAIKNNLIDVNRNLSNWNQGDPCINRWTGVLCHDRRFNDGYFHVRELQLLRMNLSGKLAPEIGNFTYLEILDFMWNKISGTIPKEIGNIITLKLLLLNGNKLIGPLPEELGYLPNLIRMQIDQNNINGSIPSSFANLNACKHFHMNNNSLSGPIPPELSQLPNLFHLLLDTNNLTGTLPPDLSKMPRLKILQLDNNNFSGSTIPESYGDMSRLFKLSLRNCNLKGPIPDLSRIPNLYYIDLSHNQLNETIPTNQLSGNITTIVLSNNNLSGTIPLNFSNLPRLKKLSIANNKLSGNVPSSIWQNKTSSANESLIVDLQNNELNTISGSTTLPSNVTLQLGGNPLCKNNSFAKFCGSQGVTGGNGSSGINCPGEPCSSPYEYSVDCVCSAPLYVDYRLKSPGFGSDFPAFMSNFQTYLTDGLKVETNQLHITDYEWEEGPRLRMNLKVFPATVNNTTTNQKFNDSEYSRIRSTLTGWNISDSDLFGPYELMDLPAYSQVIVVSSGSGLSKGALAGIILGSIAVAVTLSAIVSLLILRIRLRDYRILSKRQHGGTRISIKIEGVRVFVFEELAAATNNFSESSQVGRGGYGKVYKGILADGTAVAIKRAQEGSLQGEREFLTEIQLLSRLHHRNLVSLIGYCDEEGEQMLVYEYMPNGTLRDHLSPYSRTPLNFTMRMKIALGSAKGLLYLHTEADPPIFHRDVKASNILLDSKFNAKVADFGLSRLAPVPDVEGVVPGHVSTVVKGTPGYLDPEYFLTRKLTDKSDVYSLGVVFLEIATGRAPISHGKNIIRQVTSDYQSGGLVAVMDERLGPCPSECVQPFLTLALKCCEDVPDDRPKMAEVVRELENIWSMIPESNGKVAEYVSSDSGTLFSSQPSSSIPFASVEISGSDLISGDIPTIKPR	939

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst7g01531	939	SUPERFAMILY	L domain-like	44	390	-	-
	Arst7g01531	939	Gene3D	Ribonuclease Inhibitor	29	183	IPR032675	-
	Arst7g01531	939	FunFam	LRR receptor-like serine/threonine-protein kinase HSL2	689	898	-	-
	Arst7g01531	939	Pfam	Leucine rich repeat N-terminal domain	30	68	IPR013210	-
	Arst7g01531	939	CDD	STKc_IRAK	619	885	-	-
	Arst7g01531	939	Gene3D	Ribonuclease Inhibitor	184	292	IPR032675	-
	Arst7g01531	939	SUPERFAMILY	Protein kinase-like (PK-like)	598	904	IPR011009	-
	Arst7g01531	939	FunFam	Probable LRR receptor-like serine/threonine-protein kinase At1g06840	30	191	-	-
	Arst7g01531	939	ProSiteProfiles	Protein kinase domain profile.	613	887	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst7g01531	939	Gene3D	Phosphorylase Kinase; domain 1	585	688	-	-
	Arst7g01531	939	SMART	serkin_6	613	887	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst7g01531	939	FunFam	Leucine-rich repeat protein kinase family protein	579	688	-	-
	Arst7g01531	939	ProSitePatterns	Protein kinases ATP-binding region signature.	619	641	IPR017441	GO:0005524
	Arst7g01531	939	Pfam	Protein kinase domain	614	880	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst7g01531	939	Gene3D	Transferase(Phosphotransferase) domain 1	689	900	-	-
	Arst7g01531	939	PANTHER	RECEPTOR-LIKE PROTEIN 55	39	886	-	-
	Arst7g01531	939	Gene3D	Ribonuclease Inhibitor	293	420	IPR032675	-
	Arst7g01531	939	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	733	745	IPR008271	GO:0004672\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst7g01531	Arst-Chr7	16667788	16675201	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst7g01531	9	896	Receptor kinase-like Gene Family	AT5G01950	56.464	0.0	962

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-VIII-1	Arst7g01531		Pkinase	6.1e-47	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst7g01531	-		-	gmx:100786467	1229.54