Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g01454 ATGGAGGAAGAGGATGAAGATGGAAGCGTTGAAAGCTTACTAAGATGGGCATCACAGATTGGAATATCGGATGCATCAACAACCACCCACCACTCTCTCTCTCTGGGTTCTTCTCTCTCTGTCTCTCACTTTCCTCACTCTGGAGGTAGAGGTTTGGGTGCTGTAAGAGACCTTAGGATGGGAGAACTCATTCTCAGAGTTCCAAAATCTGCTTTGATGACGACTGACAGTGTTATGCAAGATACAAACCTCTCTCAAGCTCTTAATAGGCACCCTTCTCTTTCTTCGACCCAGATACTGAATGTTTGCCTGCTGTATGAAGTTGGAAAAGTAAAGGCTTCGAGGTGGTATCCTTACCTCGTGCATTTACCAAAGAGTTATGACATCCTAGCCATGTTTGGTGAATTCGAGAAAACTGCTCTGCAAGTGGATGAGGCTATATGGGTAACTGAAAAAGCCGTGCTAAAAGCCAAATCAGAGTGGAAGCAAGCTCATGCTTTGATGGAAGATCTCAAATTTAAGCCCCAGCTTCTAACATTTAAGGCTTGGGTGTGGGCTTCTGCAACGATATCTTCCCGGACATTGCATATACCGTGGGATTCAGCTGGGTGTTTATGCCCTGTGGGTGACTTGTTTAATTATGATGCACCTGGAAAGGAGCCATCTGACATTGGGGATCTAGAGGATTTGCTATCTAGCTCTTCGATCCATGATGGTTCCTTATCAAATGAAGACAATACTACAGTCGCTGATGCAGAGCAGCTTGATTCCCAGTCTCAGAGATTAACAGATGGGGGGTTTGAAGATGATGCAAATGCATATTGCTTTTATGCTAGGGCAAATTACAATAAAGGAGATCAGGTTCTGCTATGTTATGGAACTTACACAAATTTGGAGCTTCTTGAACACTATGGTTTTATCCTACAAGAAAATCCAAATGATAAAGTTTTTATTCCTTTGGAACCTGCTGTGTATTCTTCCACTTCTTGGTCCAGGGAATCATTGTACATCCATTACAATGGGAAGCCTTCCTTTGCGCTACTAGCTGCATTGCGGCTGTGGGCGACCCCTCAAATCAAGAGGAGGTCTGTTGCACATTTTGTTTATTCCGGCTCTAAAATCTCTGCAGACAATGAAATTTTCATCATGAAATGGCTATCGAAGACTTGCCATGGTGTCTTAAAGAATTCGCCAACATCTATTGAAGATGACACCTTGCTCCTGAATGCAATGGATAATAGTCAAGATTTTTGTACTTTTTTGGAGGTTACAAAACTTATGTCTTTCCGGGATGAAGTTGATACCTTCTTAGAAGTTCATAATATGAAGGATAAATGTAGTGATAGCAATATAGTTTTATCTAGAAAAACAAGGTGGTCTATGAATAAGTGGAAGTTGAGCATTCAATGGAGAATCAATTATAAGAAAGTCCTCCTTGATTGTATCTCTTATTGTAGTCAAATATTGGATTCTCTCATGGAATAA 1485 0.4121 MEEEDEDGSVESLLRWASQIGISDASTTTHHSLSLGSSLSVSHFPHSGGRGLGAVRDLRMGELILRVPKSALMTTDSVMQDTNLSQALNRHPSLSSTQILNVCLLYEVGKVKASRWYPYLVHLPKSYDILAMFGEFEKTALQVDEAIWVTEKAVLKAKSEWKQAHALMEDLKFKPQLLTFKAWVWASATISSRTLHIPWDSAGCLCPVGDLFNYDAPGKEPSDIGDLEDLLSSSSIHDGSLSNEDNTTVADAEQLDSQSQRLTDGGFEDDANAYCFYARANYNKGDQVLLCYGTYTNLELLEHYGFILQENPNDKVFIPLEPAVYSSTSWSRESLYIHYNGKPSFALLAALRLWATPQIKRRSVAHFVYSGSKISADNEIFIMKWLSKTCHGVLKNSPTSIEDDTLLLNAMDNSQDFCTFLEVTKLMSFRDEVDTFLEVHNMKDKCSDSNIVLSRKTRWSMNKWKLSIQWRINYKKVLLDCISYCSQILDSLME 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g01454 494 Pfam SET domain 49 293 IPR001214 GO:0005515
Arst7g01454 494 Gene3D - 320 494 IPR036464 -
Arst7g01454 494 ProSiteProfiles SET domain profile. 37 293 IPR001214 GO:0005515
Arst7g01454 494 SUPERFAMILY SET domain 9 311 IPR046341 -
Arst7g01454 494 CDD SET_LSMT 48 307 - -
Arst7g01454 494 Gene3D set domain protein methyltransferase, domain 1 7 307 - -
Arst7g01454 494 Pfam Rubisco LSMT substrate-binding 343 415 IPR015353 -
Arst7g01454 494 FunFam Protein SET DOMAIN GROUP 40 10 307 - -
Arst7g01454 494 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 9 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g01454 Arst-Chr7 15334741 15337599 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Arst7g01454 SET 7.4e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g01454 - - ahf:112702602 919.457