Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g01446 ATGGCACCAGTTTCATTACCCCCAGGTTTCAGGTTCCATCCAACTGATGAAGAACTTGTTGCTTATTACCTCAAAAGGAAGATCAATGGCCGTAAGATTGAGTTGGAGATCATTGCTGAAGTTGATCTCTACAAGTGTGAACCATGGGACTTGCCAGGGAAGTCATTGTTACCGGGGAAGGATTTGGAGTGGTATTTCTTTAGTCCTCGAGATAGGAAGTATCCAAATGGGTCAAGAACGAACCGTGCAACAAAATCTGGGTATTGGAAGGCGACAGGGAAGGACAGAAAAGTAAATTCACAATGTCGTGCTGTGGGTATGAAGAAAACCCTAGTTTACTATCGTGGAAGGGCACCTCATGGCTCTCGCACTGATTGGGTTATGCATGAATATCGTCTTGATGATAGAGAATGTGAAAATGCTTCTTCTGGCTTGCAGGATGCATATGCACTTTGTCGTGTGTTCAAGAAGAGTGCAGTTATAACCCCTAAAGTTGATGAGGAACATCATCATCACCATCACTATGTTAATGCTAATAATCACAATAATAGCAGCCATGCTTTGCCAATTACAAGTGATCAATCGTCAAGTATGGAGTTATATTCTGAAGGAAGGGGTGAAGATTTGGATAATAGCTCTAATTATTTGGTTCCCATTGATACTACTTCCACACTACCCCTCAACAACATGGTGATGAACAATAATAATAGTGATGCTTCTTTCAATAGTAGGGATAATAATGGAAAATGGTCACAATTTATTTCAGAAGATCCATTGTTCAGCTTTCCAACTTCCTCCTCATCATTTGCTAATAGTTATGGATCTATAACATACCCTCCATCCAAGGTGGATATAGCACTAGAGTGTGCAAGGATGCAACATAGGTTCACCATGCCTCCATTGGAGGTAGAGGACTTCCCTCATGTTGGAACCTCGGAGCTGAAAATGACAGAATTAGCCTCGGGTGCCGGATCCACCGTGCACGGAACCCGAAACGAAACCGATATCTTGCAGGAAATTCTTTCGGTTGCTCATGCTTCCCAGGAGTTGATAAACCACTCCAGCTACTCATCATCATGGGGTGGTGATGGTGGTGGCAACCATGAAAATTGTGCAACTCATGGAGATGATTTCACTTTCATGGTTGGTAGCACTAACTACAATAATAATAATTTGAATGACATTAACTCCATGAGATATGTTGATAGAAATTGGGAAGATCCAAACACTTCAAGATCCATTGATATTGGATATTTGGATGAAGAATTTAAGGGAGAGAGGATGGTAGAGAATTTAAGATGGGTTGGAATGTCTACAAAAGATTTAGAAAAGAACTTCACGGAAGAGCAAAAGATTGTTCCAATAGAGGATATATCAAGCTTCCAGACAAATAATAAAGAAGAAAATGAGAATCTGAGCAACACCATAGCAACAAGGAACTATTGA 1446 0.4073 MAPVSLPPGFRFHPTDEELVAYYLKRKINGRKIELEIIAEVDLYKCEPWDLPGKSLLPGKDLEWYFFSPRDRKYPNGSRTNRATKSGYWKATGKDRKVNSQCRAVGMKKTLVYYRGRAPHGSRTDWVMHEYRLDDRECENASSGLQDAYALCRVFKKSAVITPKVDEEHHHHHHYVNANNHNNSSHALPITSDQSSSMELYSEGRGEDLDNSSNYLVPIDTTSTLPLNNMVMNNNNSDASFNSRDNNGKWSQFISEDPLFSFPTSSSSFANSYGSITYPPSKVDIALECARMQHRFTMPPLEVEDFPHVGTSELKMTELASGAGSTVHGTRNETDILQEILSVAHASQELINHSSYSSSWGGDGGGNHENCATHGDDFTFMVGSTNYNNNNLNDINSMRYVDRNWEDPNTSRSIDIGYLDEEFKGERMVENLRWVGMSTKDLEKNFTEEQKIVPIEDISSFQTNNKEENENLSNTIATRNY 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g01446 481 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
Arst7g01446 481 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Arst7g01446 481 Gene3D NAC domain 15 161 IPR036093 GO:0003677|GO:0006355
Arst7g01446 481 ProSiteProfiles NAC domain profile. 6 157 IPR003441 GO:0003677|GO:0006355
Arst7g01446 481 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 220 - -
Arst7g01446 481 FunFam Nac domain-containing protein 86 15 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g01446 Arst-Chr7 15291826 15297180 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g01446 1 468 NAC Transcription Factor Family AT1G65910 52.754 1.81e-146 431
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Arst7g01446 NAM 1e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g01446 - - gmx:100809019 607.06