Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g01404 ATGAAAAGAAACATTGATCTTGAAGTTGAAGCCTCTGCCGAACAAGAATCCGAAGTTAGCAGCCAGGTTGCATCCAGTGTCTCTATCCAAGAAGCCTCAGCAGGTCCTTACAGTGACAGCCTCGATAACTCTTTCATCAGGAATCCAATCGCAGTTCATCCTAACTGGGATGCTGCCTCACTTGACTTAACTCTCAACTTCAAGAACAATGAGTTAGGGGCAACAAGAGATTCATTAGGATTCTCATTCTCAACCACTACTAGTGAGAGCAGCAATGACCCTGCCTCTCAGACCACAGAATCCACCGCGCCGCGAAGTTTCTCTTGCACTTACTGCCAGCGCAAGTTTTTCAGCTCTCAAGCTCTTGGTGGACACCAGAATGCTCACAAGAGAGAAAGGACATTGGCAAAAAGGGCCATGAGAATGGGATTTTTCTCTGAGAGATATGCAAGTCTAGCTTCTCTGCCTCTGCATGGTTCTTTCAGGTCTTTCGGAATAAAGGCGCATTCTTCGACAATGCACCATGGCTTCTCACCAACAATAATGAGGCCTGCTCCTGAGGTGAAAAGCAATGCAAGATTTGAGCAAGGATATGTTGGCCTTCCAATGTTCTCGGAGGATGATGACTCGGAACTCATGTGGCCGGGTAGTTTTCGCCAGGTCGCAGATGCTGGCAAAAATAATCATCGGGAGTTCATACTGACTGGAAATCCAAATTTGAGTTTCACTGAGGTGAGTCCACCAGAAGAGATAGAGAACTCAGCACCAGATTTGACATTGAAACTTTGA 789 0.4626 MKRNIDLEVEASAEQESEVSSQVASSVSIQEASAGPYSDSLDNSFIRNPIAVHPNWDAASLDLTLNFKNNELGATRDSLGFSFSTTTSESSNDPASQTTESTAPRSFSCTYCQRKFFSSQALGGHQNAHKRERTLAKRAMRMGFFSERYASLASLPLHGSFRSFGIKAHSSTMHHGFSPTIMRPAPEVKSNARFEQGYVGLPMFSEDDDSELMWPGSFRQVADAGKNNHREFILTGNPNLSFTEVSPPEEIENSAPDLTLKL 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g01404 262 ProSitePatterns Zinc finger C2H2 type domain signature. 109 129 IPR013087 -
Arst7g01404 262 MobiDBLite consensus disorder prediction 14 38 - -
Arst7g01404 262 Gene3D Classic Zinc Finger 85 152 - -
Arst7g01404 262 MobiDBLite consensus disorder prediction 1 38 - -
Arst7g01404 262 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 43 179 IPR044246 GO:0009788
Arst7g01404 262 SUPERFAMILY beta-beta-alpha zinc fingers 104 134 IPR036236 -
Arst7g01404 262 FunFam Zinc finger protein 2 84 153 - -
Arst7g01404 262 ProSiteProfiles Zinc finger C2H2 type domain profile. 107 134 IPR013087 -
Arst7g01404 262 MobiDBLite consensus disorder prediction 84 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g01404 Arst-Chr7 14651650 14653880 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g01404 89 262 C2H2 Transcription Factor Family AT1G66140 48.276 2.48e-49 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Arst7g01404 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g01404 - - gmx:100788768 347.821