Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g01397 ATGCCGTTAGAAGGGATTTTCATGGAAGCAAGTTCATCAACCACACCTACCCCTGATCTTTCCCTTCAAATAAGCCCTCCAACTATCTCTTCTTCTTCATCTTCTTTGATCTGCAAAGGTAGTAGTAGTAGTAGTAGTAATCATCATAATAACCATAATAATAATAATAATAACTTCCCTGAGCTTTCTCTTGGAAGCAATTTCATCAATTATTCAAATAGCAGCAGCAGCAGCAGTTATTATAGAGCGATTAGCGGTGCTCATCATCACATAAATTATGGAGGAGTTTCACTTCTTGATGCATCTGACGGTGGAGGAGTGTTAAGAAGGCCAATCAAGGGTATTCCGGTGTATCACAACCGTTCGTTTCCCTTCATGGCAACATCATCATCACCGTCAACAATGGAATATTCTAGAGAAAACAACAAGGTTAATATGTGTTCATATCACCACCACCAATACATGATTCCTTCTTCATCACCATCATCACTACCTAATAATAACAGTAATTACTTTGTTGGACCCGCACCTTCTTCTTCTTCTTCTTCTTCGCCGGCTTTGGATCCAATCACAAGGCTCACTGCCTTCAAATCTCATCATCATCCATTGCACCATCATCATCATGAAGTACCACCATCGCATCATCATCATCATCACCATCATCATGGTGGGTTTATGATGCGATCCAGCAGGTTCTTGCCCAAGCTACCAACAAAGAGGAGCATGAGAGCGCCCAGAATGAGGTGGACAAGCACCCTCCATGCCCGATTTGTTCATGCTGTTGAGCTTCTTGGCGGCCATGAAAGAGCAACTCCAAAGTCAGTTCTTGAACTCATGGATGTGAAGGATCTCACATTAGCCCATGTCAAAAGCCATTTGCAGATGTATAGAACTGTTAAGACCACTGACAAGCCTGCAGCTTCTTCAGATGGATCCGGGGACGATGACATGTCGCCGGTGGGCGGCAGCGGTGACTGTAGTGGCAGTCTCCGGCAATTTTCGGACCAAAGAGGGCGGCCGGATCGGTCATTATTGCAACAAGATATGGACTACTCTTCCACCACCACCACTCTATGGAGTAACTCTTCAAGTTGTAGAGAGACATGGCAACAAACTACATCTGATATAAATGGTCTAAGACAACCTATCTTACACTCTCAAACAAAATCGGGAGGGCAAAATAGTCATATTCAGGAGTGCGATTCAACGCAACTGAAGAACAATTTGCAAGGTTCTAATAATTTGGAATGCAAGAACCCATGCTTGGAGTTCACATTAGGCAGACCTGATTGGAATGGCAAAGAACAAGCCTAA 1314 0.4353 MPLEGIFMEASSSTTPTPDLSLQISPPTISSSSSSLICKGSSSSSSNHHNNHNNNNNNFPELSLGSNFINYSNSSSSSSYYRAISGAHHHINYGGVSLLDASDGGGVLRRPIKGIPVYHNRSFPFMATSSSPSTMEYSRENNKVNMCSYHHHQYMIPSSSPSSLPNNNSNYFVGPAPSSSSSSSPALDPITRLTAFKSHHHPLHHHHHEVPPSHHHHHHHHHGGFMMRSSRFLPKLPTKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKPAASSDGSGDDDMSPVGGSGDCSGSLRQFSDQRGRPDRSLLQQDMDYSSTTTTLWSNSSSCRETWQQTTSDINGLRQPILHSQTKSGGQNSHIQECDSTQLKNNLQGSNNLECKNPCLEFTLGRPDWNGKEQA 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g01397 437 MobiDBLite consensus disorder prediction 1 58 - -
Arst7g01397 437 NCBIfam myb-like DNA-binding domain, SHAQKYF class 245 298 IPR006447 GO:0003677
Arst7g01397 437 MobiDBLite consensus disorder prediction 8 58 - -
Arst7g01397 437 Gene3D - 244 301 - -
Arst7g01397 437 FunFam Myb family transcription factor 243 301 - -
Arst7g01397 437 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 18 435 IPR044847 GO:0000976|GO:0006355|GO:0010158
Arst7g01397 437 MobiDBLite consensus disorder prediction 200 224 - -
Arst7g01397 437 MobiDBLite consensus disorder prediction 300 348 - -
Arst7g01397 437 SUPERFAMILY Homeodomain-like 242 298 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g01397 Arst-Chr7 14593832 14600763 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g01397 227 434 G2-like Transcription Factor Family AT5G16560 60.550 1.43e-70 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Arst7g01397 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g01397 - - lja:Lj0g3v0089499.2 359.377