Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g01391 ATGGAGGAAGAGGATGAAGATGAAAGCATTGAAAGCTTACTAAGATGGGCATCACATCTTGGAATTCGGACCGACCAACCCCACCACTCTCTCTCTCTGGGTTCTTCTCTCTTTGTCTCTCACTTTCCTCACTCTGGAGGTAGAGGTTTGGGTGCTGTAAGAGACCTTAGGATGGGGGAACTCATTCTCAGAGTTCCAAAATCTGCTTTGATTACAAGTGATAGTGTTATGCAAGATACAAACCTCTCTCAAGCTCTTAATAGGCACCCTTCTCTTTCTTCGACCCAGATACTGAATGTATGCTTGTTGTATGAAGTTGGAAAAGGAAAGGCTTCGAGGTGGTATCCTTACCTCATGCATTTACCAAAGAGTTATGACATCCTAGCCATGTTTGGTGAATTCGAGAAAACTGCTCTGCAAGTGGATGAGGCTATATGGGTAACTGAAAAAGCCGTGCTAAAAACCAAATCAGATTGGCAGCAAGCTCATGCTTTGATGGAAGATCTCAAATTTAAGCCCCGGCTTCTAACATTTAAGGCTTGGGTGTGGGCTTCTGCAACGATATCTTCCCGGACATTGCATATACCGTGGGATTCAGCTGGGTGTTTATGCCCTGTGGGTGACTTGTTTAATTATGATGCACCTGGAAAGGAGCCATCTGACATTGGGGATCTAGAGGATTTGCTATCTAGCTCTTCGATCCATGATGGTTCCCTATCAAATGAAGACAATACTACAGTCGCAAATACAGAGCAGCTTGATTCCCAGTCTCAGAGATTAACAGATGGGGGGTTTGAAGAAGATGCTAATGCATATTGCTTTTATGCTAGGACAAATTACAATAAAGGAGATCAGGTTCTGCTATGTTATGGAACTTACACAAATTTAGAGCTTCTTGAACACTATGGTTTTATACTACAAGAAAATCCAAATGATAAAGTGTTTATTCCTCTGGAACCTGCTGTGTATTCTTCCACTTCTTGGTCCAGGGAATCATTGTACATCCATTACAATGGGAAGCCTTCCTTTGCACTACTAGCTGCATTGCGGCTGTGGGCGACCCCTCAAATCAAGAGGAGGTCTGTTGCACATCTTGTTTATTCCGGCTATAAAATCTCTGCAGACAATGAAATTTTCATCATGAAATGGCTATTGAAGACTTGCCATGGCGTCTTAAAGAATTTGCCAACATCTATTGAAGATGACACCTTGCTCCTGAATGCAATTGATAATAGTCAAGATTTTTGTACTTTTTTGGAGGTTACAAAACTCATATCTTCCCGGGATGAAGTTGATACCTTCTTAGAAGCTCATAATATGAAGGATAAATGTAGCGAGAGCAGTATAGTTTTATCTAGAAAAACAAGGTGGTCTATGGATAAGTGGAAGTTGAGTATTCAATGGAGAATCAGTTATAAGAAAGTCCTCCTTAATTGTATCTCTTATTGTAGTCAAATATTGGATTCTCTCGTGGAATAA 1479 0.4097 MEEEDEDESIESLLRWASHLGIXRTDQPHHSLSLGSSLFVSHFPHSGGRGLGAVRDLRMGELILRVPKSALITSDSVMQDTNLSQALNRHPSLSSTQILNVCLLYEVGKGKASRWYPYLMHLPKSYDILAMFGEFEKTALQVDEAIWVTEKAVLKTKSDWQQAHALMEDLKFKPRLLTFKAWVWASATISSRTLHIPWDSAGCLCPVGDLFNYDAPGKEPSDIGDLEDLLSSSSIHDGSLSNEDNTTVANTEQLDSQSQRLTDGGFEEDANAYCFYARTNYNKGDQVLLCYGTYTNLELLEHYGFILQENPNDKVFIPLEPAVYSSTSWSRESLYIHYNGKPSFALLAALRLWATPQIKRRSVAHLVYSGYKISADNEIFIMKWLLKTCHGVLKNLPTSIEDDTLLLNAIDNSQDFCTFLEVTKLISSRDEVDTFLEAHNMKDKCSESSIVLSRKTRWSMDKWKLSIQWRISYKKVLLNCISYCSQILDSLVE 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g01391 493 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 9 423 - -
Arst7g01391 493 Gene3D set domain protein methyltransferase, domain 1 6 306 - -
Arst7g01391 493 Gene3D - 320 493 IPR036464 -
Arst7g01391 493 ProSiteProfiles SET domain profile. 30 292 IPR001214 GO:0005515
Arst7g01391 493 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 302 413 IPR036464 -
Arst7g01391 493 SUPERFAMILY SET domain 8 310 IPR046341 -
Arst7g01391 493 Pfam Rubisco LSMT substrate-binding 341 440 IPR015353 -
Arst7g01391 493 CDD SET_LSMT 37 306 - -
Arst7g01391 493 FunFam Protein SET DOMAIN GROUP 40 10 306 - -
Arst7g01391 493 Pfam SET domain 48 292 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g01391 Arst-Chr7 14488800 14492203 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g01391 48 353 NAC Transcription Factor Family AT3G56570 22.414 2.28e-06 48.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Arst7g01391 SET 1.8e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g01391 - - ahf:112702602 859.751