Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g01300 GTGAGTTCAAAGGATGGTAGCAGAGAAGATGGTTTGAGTGGTTTAAGCAGCAAAGTCTCGACCACTGCTCCTCCGACACCTCGGTCCGAGGGAGAGATCTTGAAATCCTCGAATTTGAAGAGCTTCACCTTTGCTGAACTTAAAACCGCTACGAGGAACTTTCGTCCGGATAGTGTGGTGGGAGAAGGTGGTTTTGGTTCTGTATTCAAGGGGTGGATTGATGAGCAGACACTTGTACCGGTTAAACCCGGTACTGGAATGGTCATTGCTGTGAAGAGGCATAACCAAGAAGGTGGACAAGGACACAGTGAATGGTTGACCGAGATAAATTACCTGGGGCAGCTGCGTCATCCTAATCTTGTGAAACTGGTTGGTTATTGCTTGGAAGATGATCAAAGGCTTTTGGTGTATGAGTTCTTGACCAAGTGTAGTTTGGATAATCACTTATTTAGGAGGGCTTCTTATGTTGAGCCGCTTCCTTGGAACATTCGGATAAAGGTTGCCGTTGATGCTGCTAAGGGTCTGGAATATCTCCACAGCGACGAAGCAAAAGTGATATTCAGAGACTTCAAAACTTCTAATATATTGCTTGATTCGAATTATAATGCGAAACTTTCTGATTTCGGCTTGGCAAAGGATGGACCAGCAGGTGATAAGAGCCATGTCTCTACAAGGGTGATGGGCACATATGGTTATGCTGCACCTGAATACATGGCCACAGGTCACTTGACCAAGAAGAGTGATGTATACAGCTTCGGAGTCGTTCTCCTAGAAATCATGTCCGGTAAGCGCGCCCTCGACAACAACAGGCCATCCCGGGAGCAGAACTTGATTGAATGGGCCAAACCTTACCTCACCAGCAAGCGCAGGATCTTCCAAGTCATGGATGCTCGAATCGAAGGCCAATACACACTGCGCGAGGTGATGAAACTAGCTAACCTCGCCATCAAATGCCTATCGGTCGAGCCGAGGTTTCGGCCGAAGATGGATGAGGTGGTGAGGACATTGGAGCACCTGCAGGATTCCGACGGAGAGGGATGCTCTAGAGATCAAGATTTGAAAAGGAATGGTCATAGACATAGCTCAGGAAACAGTGGCACTAAACAACATAGAAGAAAACATGAAACAGTTACAAACACCATGCAAAAAGAATGA 1155 0.4675 MGCCFSAKIKAESPPRHGVSSKDGSREDGLSGLSSKVSTTAPPTPRSEGEILKSSNLKSFTFAELKTATRNFRPDSVVGEGGFGSVFKGWIDEQTLVPVKPGTGMVIAVKRHNQEGGQGHSEWLTEINYLGQLRHPNLVKLVGYCLEDDQRLLVYEFLTKCSLDNHLFRRASYVEPLPWNIRIKVAVDAAKGLEYLHSDEAKVIFRDFKTSNILLDSNYNAKLSDFGLAKDGPAGDKSHVSTRVMGTYGYAAPEYMATGHLTKKSDVYSFGVVLLEIMSGKRALDNNRPSREQNLIEWAKPYLTSKRRIFQVMDARIEGQYTLREVMKLANLAIKCLSVEPRFRPKMDEVVRTLEHLQDSDGEGCSRDQDLKRNGHRHSSGNSGTKQHRRKHETVTNTMQKE 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g01300 402 CDD STKc_IRAK 78 357 - -
Arst7g01300 402 ProSiteProfiles Protein kinase domain profile. 72 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst7g01300 402 FunFam Serine/threonine-protein kinase PBS1 158 372 - -
Arst7g01300 402 SUPERFAMILY Protein kinase-like (PK-like) 44 354 IPR011009 -
Arst7g01300 402 MobiDBLite consensus disorder prediction 386 402 - -
Arst7g01300 402 PANTHER OS01G0588500 PROTEIN-RELATED 39 358 - -
Arst7g01300 402 Pfam Protein tyrosine and serine/threonine kinase 76 354 IPR001245 GO:0004672|GO:0006468
Arst7g01300 402 MobiDBLite consensus disorder prediction 357 377 - -
Arst7g01300 402 MobiDBLite consensus disorder prediction 27 50 - -
Arst7g01300 402 MobiDBLite consensus disorder prediction 357 402 - -
Arst7g01300 402 FunFam Serine/threonine-protein kinase BIK1 39 157 - -
Arst7g01300 402 Gene3D Phosphorylase Kinase; domain 1 47 157 - -
Arst7g01300 402 Gene3D Transferase(Phosphotransferase) domain 1 159 379 - -
Arst7g01300 402 MobiDBLite consensus disorder prediction 1 50 - -
Arst7g01300 402 ProSitePatterns Protein kinases ATP-binding region signature. 78 110 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g01300 Arst-Chr7 13079918 13082027 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g01300 50 357 Glycoside Hydrolase AT3G07070 49.355 6.21e-103 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Arst7g01300 PK_Tyr_Ser-Thr 2.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g01300 - - gmx:100775335 664.07