Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g01262 ATGAGTTTTGTATTCCGGGGAACAAGAGCTGACATAGAAAATGGATTTCCAGGATTTATGCCTGAGCGACGTGCATTGCGTGTTCATCCAGCACGTCCTAGTAATTCCAATTCACTCACTTTCCTCGTCACAGTTCTCTTGTTGTTCATGATACTTAACTCGCACCAGATGTCACCAAATTTTCTGCTCTGGTTGGTGCTTGGTGTTTTCTTAATGGCTACAATGTTGAGGATGTATGCAACATGTCAACAGCTTCAAGCACAGGCTCAAGCTCATGCAGCAGCAGCTAGTGGGCTTTTAGGCCACACTGAGCTGCGGTTGCATATGCCGCCATCAATTGCCCTTGCCACCAGAGGACGCCTACAAGGCCTCAGACTTCAACTTGCACTTCTTGATCGGGAGTTTGATGAGCTAGATTATGAAACACTAAGGGCTCTTGATTCTGATAATGTTCCTACTGCACCTTCCATGACCGAGGAAGAGATAAATGCACTTCCTGTACACAAATACAAGGTTTCTGGTCCACAAAACAGTGGCACTGGTTCCTCAATGCAACAGGGGTCTTCTTCCACTCCTGCGGAGAAGAAGCAAGACAATTCAAATGTAGCTGGAAGCATGAAAGCCTCTGATGATGAGCTGACTTGCAGTGTATGTTTGGAGCAAGTTAACATTGGGGATGTACTTCGTAGCTTGCCCTGCTTGCATCAGTTTCATGCGAATTGCATTGATCCCTGGCTGCGACAACAAGGAACATGCCCCGTCTGCAAATTCAGAGCAGGATCTGGGTGGAATGAAAGTGGAGCTAATGATATTGCAGATATGGTTTGA 828 0.4626 MSFVFRGTRADIENGFPGFMPERRALRVHPARPSNSNSLTFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLMATMLRMYATCQQLQAQAQAHAAAASGLLGHTELRLHMPPSIALATRGRLQGLRLQLALLDREFDELDYETLRALDSDNVPTAPSMTEEEINALPVHKYKVSGPQNSGTGSSMQQGSSSTPAEKKQDNSNVAGSMKASDDELTCSVCLEQVNIGDVLRSLPCLHQFHANCIDPWLRQQGTCPVCKFRAGSGWNESGANDIADMV 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g01262 275 MobiDBLite consensus disorder prediction 173 206 - -
Arst7g01262 275 MobiDBLite consensus disorder prediction 170 206 - -
Arst7g01262 275 SUPERFAMILY RING/U-box 210 259 - -
Arst7g01262 275 Pfam Ring finger domain 214 256 IPR001841 -
Arst7g01262 275 ProSiteProfiles Zinc finger RING-type profile. 215 256 IPR001841 -
Arst7g01262 275 SMART ring_2 215 255 IPR001841 -
Arst7g01262 275 CDD RING-H2_PA-TM-RING 214 256 - -
Arst7g01262 275 PANTHER TARGET OF ERK KINASE MPK-1 1 261 - -
Arst7g01262 275 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 147 260 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g01262 Arst-Chr7 12441614 12445655 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g01262 1 275 C3H Transcription Factor Family AT3G55530 76.703 1.45e-143 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g01262 K16283 - gmx:100777936 452.595