Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g01256 ATGACAGGGTTTGGATCTTCATGTGGAGCATGCAAGTTCCTAAGGAGAAAGTGTGGTAGTGGTTGTGTTTTTGCTCCTTACTTCTCTTATGACCAAGCAGCAACACATTTTGCAGCGGTTCATAAGATCTATGGTGCTAGTAATGTGTCAAGGCTATTGTCACATCTTCCAATCCTTAATAGAAGTGATGCTGCCATCACTATCACTTATGAAGCTCTTGCTCGCATGCAAGATCCTATTTATGGTTGTGTTTCTCATATCTATGCATTGCAGCAACAGGTTGCAAGTTTGCAAGAGGAGATAGATATTATTGGGAGTCTAATGACAAATTCTACAATTGGTGCTACCAATTGTGGCATAAATAATGTTGAAGCACCAATAACAAAAATGGAGTACTCGAACTGTGGAATACAATACCCTATGCAAGATGATGATGATCATCAATGTTATCAAAATGAAATGGCCAATAATATTCTTTCTCAAGAAGGAAGTGTGACACCCCGCCAAGGCTATGGCTCACACATGGATATAGAGCTTCCAAATAATGATGGAAATGGGTTTGAAGGGCCAATTGTATTTTATGACCATCCCAACTTCAATAATAATAATCCATTAGAGAAGTTCCTATCTGGAATTGATCAAGAGGGATTCATGAACCACCCGTGA 666 0.3919 MTGFGSSCGACKFLRRKCGSGCVFAPYFSYDQAATHFAAVHKIYGASNVSRLLSHLPILNRSDAAITITYEALARMQDPIYGCVSHIYALQQQVASLQEEIDIIGSLMTNSTIGATNCGINNVEAPITKMEYSNCGIQYPMQDDDDHQCYQNEMANNILSQEGSVTPRQGYGSHMDIELPNNDGNGFEGPIVFYDHPNFNNNNPLEKFLSGIDQEGFMNHP 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g01256 221 Pfam Lateral organ boundaries (LOB) domain 7 103 IPR004883 -
Arst7g01256 221 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
Arst7g01256 221 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g01256 Arst-Chr7 12288169 12290747 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g01256 1 150 AS2 family AT5G06080 54.248 2.19e-55 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Arst7g01256 LOB 3.1e-34 No_clan