Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g01254 ATGGCAAAGCGTTGGTGGGATGAAGAACCACCCCACAACACTCCAACAAGCAGCACCAACGGCGACCAAGACAACAACGATGGCGGCGATGACAATAACAACTCCAGCGCGGCGGAGCGAAGAGGAGGAAGAGGCCGCAGGCCACGAGGCCGGCCACCGGGGTCAAAGAACAAGCCAAAACAACCGCTAGTGATTAAGGAGGAGCTCCCAAACGCCCTTCAAAGTCATATTCTAGAGATCAGCGACGGAGCAGACGTGGCTGATTCCCTTTCCACTTTCGCAACCCGTCGTCACCGTGGCGTCGCCGTGCTAAGCGGAACCGGCACTGTCACTGACGTCAATCTCGGGCAGCCTGCGGCGCCCGGAGGCGTCGTTTCACTCCAAGGAACTTTCCAGATCCTTTCCCTTTCCGGTGCGATTCTTCCCCCGCCATCCCCGCCGAGCGCCACCGGACTAACGGTTTACCTCGCCGGAGTTCAAGGGGAGGTGGTTGGCGGTAGGGTGGTAGGACCGCTGGTGGCTTGTGGACCAGTGATGGTGGTTGCAGCAACGTTTGCTAATGCCACGTATGAAAGGCTACCGTTTGAGGAAGAAGAAGAAGAAGAAGATGATCAGGAAGAAGATGAAGTGATGCGGGTGCAGGTGGAGCCGCAGCAGGAGCAACAATCTGGTGTGAACGAGGGTTGTACTGGACCACCTGAACCACCATCACAACCACCACAGGTTTACAGTAATGATCGTTCCGGTTTGTTCTCCGATAACGGTGAAATGGTGACGCATGATGATGTATTTTGGTGA 798 0.5602 MAKRWWDEEPPHNTPTSSTNGDQDNNDGGDDNNNSSAAERRGGRGRRPRGRPPGSKNKPKQPLVIKEELPNALQSHILEISDGADVADSLSTFATRRHRGVAVLSGTGTVTDVNLGQPAAPGGVVSLQGTFQILSLSGAILPPPSPPSATGLTVYLAGVQGEVVGGRVVGPLVACGPVMVVAATFANATYERLPFEEEEEEEDDQEEDEVMRVQVEPQQEQQSGVNEGCTGPPEPPSQPPQVYSNDRSGLFSDNGEMVTHDDVFW 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g01254 265 CDD DUF296 76 157 IPR005175 -
Arst7g01254 265 MobiDBLite consensus disorder prediction 194 210 - -
Arst7g01254 265 SUPERFAMILY AF0104/ALDC/Ptd012-like 71 199 - -
Arst7g01254 265 MobiDBLite consensus disorder prediction 1 64 - -
Arst7g01254 265 ProSiteProfiles PPC domain profile profile. 70 206 IPR005175 -
Arst7g01254 265 MobiDBLite consensus disorder prediction 192 265 - -
Arst7g01254 265 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 18 234 IPR014476 GO:0003680
Arst7g01254 265 Pfam Plants and Prokaryotes Conserved (PCC) domain 75 186 IPR005175 -
Arst7g01254 265 Coils Coil 196 216 - -
Arst7g01254 265 Gene3D - 74 204 - -
Arst7g01254 265 FunFam AT-hook motif nuclear-localized protein 73 201 - -
Arst7g01254 265 PIRSF ESCAROLA 4 261 IPR014476 GO:0003680
Arst7g01254 265 MobiDBLite consensus disorder prediction 11 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g01254 Arst-Chr7 12147125 12148413 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g01254 46 200 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 73.548 1.11e-66 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g01254 - - gmx:100787100 237.269