Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g01250 ATGGAGGAGGAATATGATAATAATAAGTGGTTGATGTGGATGAAGAGAAAACATAGTAGTTACTCATACTTATCATGGGAAGAGAGGGCTTTTGCAGAAGATGCAGCAAGAGTTCTTGGTGGAAGCACATGGCCGCCAAGATCATACACTTGCAATTTTTGCCATAGACACTTCACCTCTGCTCAAGCACTTGGTGGTCACATGAATGTTCACCGAAGAGATAGGGCTAGACTCAAACAATCATCATCATCATCATTAGGAGAAGATAACCAACAACATGCTATAACAGGCTCTTACTCTTCTTCAATTAAAAGGGGGCAACAGAAGAATAATTTTGAAGAAGATGAAGACACCATGATCAGTAGTTGTAAGAAGTTAAGGACTACTACCACCATTTTCTGCCTCAAGCCATGTTCAAACGATAATGGAATTGAAGACTTGGATCTTGAACTCAGGCTAGGCGCCAAACAACAAAAAGTTAACTAA 486 0.3992 MEEEYDNNKWLMWMKRKHSSYSYLSWEERAFAEDAARVLGGSTWPPRSYTCNFCHRHFTSAQALGGHMNVHRRDRARLKQSSSSSLGEDNQQHAITGSYSSSIKRGQQKNNFEEDEDTMISSCKKLRTTTTIFCLKPCSNDNGIEDLDLELRLGAKQQKVN 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g01250 161 ProSiteProfiles Zinc finger C2H2 type domain profile. 49 76 IPR013087 -
Arst7g01250 161 SMART c2h2final6 49 71 IPR013087 -
Arst7g01250 161 MobiDBLite consensus disorder prediction 80 107 - -
Arst7g01250 161 PANTHER OS07G0101800 PROTEIN 14 112 - -
Arst7g01250 161 Gene3D Classic Zinc Finger 45 128 - -
Arst7g01250 161 Pfam C2H2-type zinc finger 49 73 - -
Arst7g01250 161 ProSitePatterns Zinc finger C2H2 type domain signature. 51 71 IPR013087 -
Arst7g01250 161 SUPERFAMILY beta-beta-alpha zinc fingers 46 75 IPR036236 -
Arst7g01250 161 MobiDBLite consensus disorder prediction 76 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g01250 Arst-Chr7 12033030 12034300 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g01250 12 81 C2H2 Transcription Factor Family AT2G37740 68.571 1.04e-26 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Arst7g01250 zf-C2H2_6 1.2e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g01250 - - aip:107608478 301.212