Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g01234 ATGGCTCCTCCTTCAGATATCAATCACTTTTCTCATCCATGTATATATGGGGATTATAGTTCTTCACGCTCAGAGAGAAGGCCTAGTTTCATGAAATGGTTAAGTAGGCTTTTCAAAGGAGGGTCCAATAGAGGAAGAGGTGGCCGTCGCCTGCAAGAACCGGACGAGGAAAACATCGCTTGGCGCGCACCCCCTAGACCATTTGATGATGGTTCTAGAGCTCATAACAGGGAGAATGATGATCTCGGCCATGCGATGTCACGATCTTCAGCAGAAGATTTAAAGCGACCAAATGCACATGAAGGATATAATTGGGGGACAGACAATGATGATTATGGAAAAGCACTTCAAGCTGCATACCCTCCATATAATGCTGCTCCATATTACCCCAGAGATTATAGAAAAATATGTGGAGGGTGTAACCAGGAGATACTCTATGGAAATTGTTTGGGATGCTTGGATACTTATTTTCATCCAGATTGCTTTCGTTGTCACGCTTGTCAGTATCCCATTACCGAGCGCGAGTTTTCTTTGTCAGGGAAGCATCCATATCACAAGTCCTGTTTTAAAGAGTTGACTCACCCAAAATGTGAAGTTTGCTTCCAATTTATTCCTATAAATGCTGCTGGATTGATTGAGTATAGGTGCCACCCCTTTTGGTCCCAAAAATACTGTCCATCTCATGAATATGATTATACATCTCGCTGCTGCAGTTGCGAAAGATTGGAGCCTCGGAATGTAAAATACTATAGACTTGAAGATGGAAGAAGTTTGTGCATGGAGTGCATGGAATCTGCTATAATAGACACTGGTGATTGCCAGCCTCTTTATCATTCTATCAGAGATTACTATGAAGGGATGAATATGAAAATAGGTCAACAAATTCCCATGCTTCTTGTGGCCAGAGAAGCACTCAATGAAGCTATTGTTGGGGAGAAAAATGCTGTTCATCACATGCCAGAAACAAGGGGCATATGCCTTTCAGAAGAGCAGACTATCACCAGTATACATAGAAAGCCAAGACATGGAGGCCATCGACGAATGACGAGAACGCAAAATCAAATGCTGGTTAGAAGATGTGAAGTTACAGCAATTCTTGTCCTATATGGTCTTCCAAGGCTACTCACAGGTGCCATCCTTGCACATGAGTTAATGCATGCATGGTTAAGACTTAAAGGTTACCGCAACCTTAATCCTGAAGTAGAGGAAGGTATATGTCAGGTTCTCTCATACATGTGGCTTGAGTCAGAAGTAATGCCATCAACATCTGCAGCAGCAGCATCATCATCTTATCCTTCTTCATCCTCCTCTTCCTCAAAGAAAGGAGCAAAGTCTCATGTTGAAAACAAGTTGGGAGAGTTTTTCTTGAATCAGATTGCAAATGATTCTTCCCCTGCTTATGGTGGTGGCTTTAGAGCTGCAAATGAAGCTGTTAATAAATATGGTTTACGTGCCATTCTTGACCATATTCGTTACACTGGTCTTCTACCAGAGTAG 1497 0.4235 MAPPSDINHFSHPCIYGDYSSSRSERRPSFMKWLSRLFKGGSNRGRGGRRLQEPDEENIAWRAPPRPFDDGSRAHNRENDDLGHAMSRSSAEDLKRPNAHEGYNWGTDNDDYGKALQAAYPPYNAAPYYPRDYRKICGGCNQEILYGNCLGCLDTYFHPDCFRCHACQYPITEREFSLSGKHPYHKSCFKELTHPKCEVCFQFIPINAAGLIEYRCHPFWSQKYCPSHEYDYTSRCCSCERLEPRNVKYYRLEDGRSLCMECMESAIIDTGDCQPLYHSIRDYYEGMNMKIGQQIPMLLVAREALNEAIVGEKNAVHHMPETRGICLSEEQTITSIHRKPRHGGHRRMTRTQNQMLVRRCEVTAILVLYGLPRLLTGAILAHELMHAWLRLKGYRNLNPEVEEGICQVLSYMWLESEVMPSTSAAAASSSYPSSSSSSSKKGAKSHVENKLGEFFLNQIANDSSPAYGGGFRAANEAVNKYGLRAILDHIRYTGLLPE 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g01234 498 ProSiteProfiles LIM domain profile. 135 195 IPR001781 -
Arst7g01234 498 Gene3D Cysteine Rich Protein 123 194 - -
Arst7g01234 498 SMART lim_4 136 188 IPR001781 -
Arst7g01234 498 CDD LIM_DA1 137 189 - -
Arst7g01234 498 MobiDBLite consensus disorder prediction 46 99 - -
Arst7g01234 498 Pfam LIM domain 137 190 IPR001781 -
Arst7g01234 498 FunFam Protein DA1-related 2 126 190 - -
Arst7g01234 498 MobiDBLite consensus disorder prediction 38 103 - -
Arst7g01234 498 ProSitePatterns LIM zinc-binding domain signature. 137 171 IPR001781 -
Arst7g01234 498 PANTHER PROTEIN DA1-RELATED 2 33 497 IPR045218 -
Arst7g01234 498 MobiDBLite consensus disorder prediction 1 25 - -
Arst7g01234 498 Pfam Protein DA1 286 492 IPR022087 -
Arst7g01234 498 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 133 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g01234 Arst-Chr7 11731950 11736983 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Arst7g01234 DA1-like 7.7e-96 CL0126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g01234 - - gmx:100784976 834.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst7g01234 7 11731950 11736983 Arst7g01234 7 11731950 11736983 ECH