Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g01192 ATGGAATCGAAAGGTGGGAGCAGTAGTGGAAGCACAAGCAAGTGTGGGCGTTGGAATCCGACGGCAGAACAAGTTTCGGTTCTGAGTGAACTGTTCAGGTCTGGTCTGCGCACCCCAACCACTGATCAGATTCAGCGTATCTCCAACCACCTCAGCTTTTACGGCAAGATTGAGAGTAAGAATGTCTTCTATTGGTTTCAGAACCATAAAGCTAGGGACAGACACAACAAGCGCCGCAAGCTCTCTTCTTCCTTTCCTCATCACTCCAAGCATCTCAATCTTCTTCACTCTCAAAGTTTAGCTGAGATGTATCAAGTTTCAGAGCCTGAGAATAATAACAGGGTCTTATGTTGAATCCGAATCAGAGAAGCTGAGAGTGCATGCAAATGATGATGAAAATGGTGATCATCATCATCATCATCATCATCAATGCATGGATCATGATGATGATACTATGTTCTCATACACATTAATGGGAGAACAAATGGAGTATCCTCCATTGGACCTGCGCTTGAGCTTCCTCTAA 526 0.443 MESKGGSSSGSTSKCGRWNPTAEQVSVLSELFRSGLRTPTTDQIQRISNHLSFYGKIESKNVFYWFQNHKARDRHNKRRKLSSSFPHHSKHLNLLHSQSLAEMYQVSEPENNNRVIETLQLFPLNSYVESESEKLRVHANDDENGDHHHHHHHQCMDHDDDTMFSYTLMGEQMEYPPLDLRLSFL 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g01192 185 ProSiteProfiles 'Homeobox' domain profile. 11 76 IPR001356 GO:0003677
Arst7g01192 185 CDD homeodomain 17 77 IPR001356 GO:0003677
Arst7g01192 185 SMART HOX_1 13 80 IPR001356 GO:0003677
Arst7g01192 185 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 3 91 IPR044555 GO:0003700|GO:0099402
Arst7g01192 185 Pfam Homeodomain 15 75 IPR001356 GO:0003677
Arst7g01192 185 Gene3D - 14 83 - -
Arst7g01192 185 SUPERFAMILY Homeodomain-like 11 79 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g01192 Arst-Chr7 10998251 10999646 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g01192 4 185 Wox Gene Family AT3G11260 51.596 1.08e-58 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Arst7g01192 Homeodomain 1.3e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g01192 - - gmx:100820304 205.297
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g01474 10 25767995 25769428 Arst7g01192 7 10998251 10999646 ECH
Arst7g01192 7 10998251 10999646 Arst7g01192 7 10998251 10999646 ECH
Arst10g01474 10 25767995 25769428 Arst7g01192 7 10998251 10999646 PCT