Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g01190 ATGGAGTTCACCTCTTTTTCATGGGAAATCAATTCTAAAGAAGATCCAAGCATACCACAAGACTCCTATTTCGATGATTGTTTTTCCATCATCTTCAGATTCACCAAAGAATTGATCCAAATTACTCAAAGCACAAATTTTCCTTCTACTACAAGTACGGCCAATGAATCGTTCTTGGTTCCTTCTGATATCCTATGTAACTTCAGAGAAAACACTGCATTCTTACATGAAACCTTCTCTTCAGTGCCTATATCTCCGGAGATATTGGATCAAATTTTACCTGTCATGGGCGAAACCGCAAGAACGATTCTAAGCCATGAAGGGTGTGACTCCAATATGCGGAGCATTTTTGTGAACCTTTATGTTACCACGCGCATTGTTATTGAAGATTCTGATTTCTATAATGATGATATCGGTCAAAATATTCCTGAACCAGCTCAGTTCGTGAATCTGTTGGAGAGATCGAAAATTGATGAGCAAGATGATGATGTTGAAGAACAATGTGCTATTTGTTTGGAAGAGTTTGAACATGGTATTGAAGATTCACGTGTAGCGATTGTTCGTACAAATTGCTCGCATCTGTTCCATGAATGTTGTATATTCCGATGGTTTCGGCGTTGTGCCGACCGTCAATCGCCTTATTCTTGCCCATTGTGCCGCTGCAACATATTTCCAACCTCACAGAGAGATGAATAG 696 0.3966 MEFTSFSWEINSKEDPSIPQDSYFDDCFSIIFRFTKELIQITQSTNFPSTTSTANESFLVPSDILCNFRENTAFLHETFSSVPISPEILDQILPVMGETARTILSHEGCDSNMRSIFVNLYVTTRIVIEDSDFYNDDIGQNIPEPAQFVNLLERSKIDEQDDDVEEQCAICLEEFEHGIEDSRVAIVRTNCSHLFHECCIFRWFRRCADRQSPYSCPLCRCNIFPTSQRDE 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g01190 231 CDD RING-H2 168 220 - -
Arst7g01190 231 ProSiteProfiles Zinc finger RING-type profile. 168 220 IPR001841 -
Arst7g01190 231 SMART ring_2 168 219 IPR001841 -
Arst7g01190 231 Pfam Ring finger domain 167 220 IPR001841 -
Arst7g01190 231 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 134 225 IPR013083 -
Arst7g01190 231 SUPERFAMILY RING/U-box 158 226 - -
Arst7g01190 231 PANTHER RING ZINC FINGER PROTEIN-RELATED 155 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g01190 Arst-Chr7 10961824 10962519 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g01190 135 230 C3H Transcription Factor Family AT1G68070 32.292 7.29e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g01190 - - adu:110273516 360.918