Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g01189 ATGGAATCCACCGTTTTTTCGTTGCGAATTACTCCCATTGAAAATCAAGCCATACCACAAGAGTTTTATTTCGATGATTATTTCTCCATCATTCTCAATTGCACCCAAGAATTGATCCAAATTACCCAAGGCTCTGATGTTGAATTTTCTTCTACTACAACTACTGAAGCAATCTTGGTTCCCTCAGATATCCTATGTAGTTGCACTCCACTCACAGACCTCAACAGAGAAGACACAATCTTATTGCATGAAATCTTTTCTTCAGTGCCTGCATCCCCTGAGTTATTGAACCAAATTTTACCTTTCATAGGCGAAACTGCAAGAAAGATTCTAAGCCGTGAAGGGTGTAACTCTAACACGCGGGAGATTGTTGTGAACCTTCACGTTGTTACCAGGCGCAACATTGTTCAAGATTCTGATATCTATAATGATGATCTCTGTGAAAACGTTCTTGAACTAGCACAACTCGTGAATCTGTTAGAGAGATCCAAAATCGATGAGCAAGATGATGACGCTGAATGCGCTATTTGCTTGGAGAAGTTTGGCCGTGGTAACGAAGATTCAAGTGTAGAAGTTGTTCGCATAAATTGCTCGCATGTTTTTCGTGATCGTTGCATGCTCTGCTGGCTCCGATGCTGTGCCGACCATCAGTCGCCGTATTCTTGCCCATTGTGCCGCTGCCTCATATCTGCAACTTCACACGGTGACGATGAATAG 717 0.4254 MESTVFSLRITPIENQAIPQEFYFDDYFSIILNCTQELIQITQGSDVEFSSTTTTEAILVPSDILCSCTPLTDLNREDTILLHEIFSSVPASPELLNQILPFIGETARKILSREGCNSNTREIVVNLHVVTRRNIVQDSDIYNDDLCENVLELAQLVNLLERSKIDEQDDDAECAICLEKFGRGNEDSSVEVVRINCSHVFRDRCMLCWLRCCADHQSPYSCPLCRCLISATSHGDDE 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g01189 238 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 153 232 IPR013083 -
Arst7g01189 238 SUPERFAMILY RING/U-box 168 230 - -
Arst7g01189 238 ProSiteProfiles Zinc finger RING-type profile. 174 226 IPR001841 -
Arst7g01189 238 PANTHER RING ZINC FINGER PROTEIN-RELATED 163 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g01189 Arst-Chr7 10948247 10948963 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g01189 159 238 C3H Transcription Factor Family AT5G41450 35.802 5.28e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g01189 - K16282 ahf:112762800 321.242