Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g01188 ATGGAATCCACCGTTTTTTCGTTGCAAATTACTCCCATTGAAAACCAAGCCATACCACAAGAGTTTTATTTCGATGAATGTTTCTCCATCATATTCAATTGCACCCAAGAATTGATCCAAATTACCCAAAGCGCTGATGTTGACTTTTCTTCTACTACAACTACTGAAGCAATCTTGGTTCCCTCAGATATCCTATGCAGTTGTACTCCACTCACAGACCTCAACAGAGAAGACACAATTTTATTGCATGAAATCTTCTCTTCAGTGCCTGTATCCCCTGAGTCATTGGACCAAATTTTACCTTCCATAGGCGAAACTGCAAGAAGGATTCTAAGCCGTGAAGGGTGTGACTCCAACACGCGGGAGATTGTTGTGAACCTTCACGTTGTTACCAGGCGCAACATTGTTCAAGATTCTGATATCTATAATGATGATCTCTGTGAAAACGTTCCTGAACTAGCACAACTCGTGAATCTGTTAGAGAGATCCAAAATTGTTGACCAAGATGATGACGGTGAATGCGCTATTTGCTTGGAGAAGTTTGGCCATGGTAATAAAGATTCAAGTGTAGAATTTGTTCGCATAAATTGCTCGCATGTTTTTCATGATCGTTGCATGCTCCGCTGGTTCCGATGCTGTGCCGACCATCAGTCGCCGTATTCTTGCCCATTGTGCCGCTGCCTCATATCTCCAACTTCACGCAGTGACGATGAATAG 717 0.4268 MESTVFSLQITPIENQAIPQEFYFDECFSIIFNCTQELIQITQSADVDFSSTTTTEAILVPSDILCSCTPLTDLNREDTILLHEIFSSVPVSPESLDQILPSIGETARRILSREGCDSNTREIVVNLHVVTRRNIVQDSDIYNDDLCENVPELAQLVNLLERSKIVDQDDDGECAICLEKFGHGNKDSSVEFVRINCSHVFHDRCMLRWFRCCADHQSPYSCPLCRCLISPTSRSDDE 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g01188 238 CDD RING-H2 174 226 - -
Arst7g01188 238 SMART ring_2 174 225 IPR001841 -
Arst7g01188 238 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 154 233 IPR013083 -
Arst7g01188 238 ProSiteProfiles Zinc finger RING-type profile. 174 226 IPR001841 -
Arst7g01188 238 SUPERFAMILY RING/U-box 173 231 - -
Arst7g01188 238 PANTHER RING ZINC FINGER PROTEIN-RELATED 165 233 - -
Arst7g01188 238 Pfam Ring finger domain 173 226 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g01188 Arst-Chr7 10929653 10930369 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g01188 166 227 C3H Transcription Factor Family AT5G41440 38.710 4.96e-08 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g01188 - - ahf:112762800 323.168