Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g01183 ATGGCCTCCGCCTTCAGGGACCGCACCTCCGAGTTCCGGTCGGTGACGGAGACTCTCAAGAAGAAGATCGGAGCCCCCACTCCGCCACCGTTGCCTAACCAACCGGAAAATGCTCCCTCCTCCACCGACTCTCCGGTTCCAAATTCCAGATCCGAATTCAACCGAAAGGCCTCTCGGATCGGTTTGGGAATCCACGATACTTCACAGAAGATCGCAAGGCTCGCCCAGCTGGCGAAGAAATCGTCGATTTTCAATGATCCGATTGTGGAGATACAGGAAATGACGGCTGTGATTAAGAACGAGATCACGGCGCTGAACGCGGCTCTTTCGGATTTACAGACGATTCAGAACATGGAGATTGCAGATGGGATGTACTCGGAGGATAGGGTTGTTCACTCCAATGCCGTTTGTGATGACTTGAAGAGCAGGCTCATGGGCGCCACAAAGAAACTCCAAGATGTCTTGACCACTAGAACAGAGAATATCAAGGCTCATGAGAATAGGAAGCAGATATTTTCCAAGAATACGTCCAGAGAGAACCCTTTTCAGCATCACCCAAAGCCAGCCCATGTACCACCCCCGTGGTCAAATTCATTAAATCCATCTGAAGACTTGCAACAGCAGTCAGCACTAACTTCAAATGGAGTACCAGTTGGCAATCAACTAAGACGAAGGTTAGCTGTGGACAATGCTCCAACCCCCCAAATGGAAATGTCTATGGTACAGCAGGTTGTTCCTCACCAAGATAATTATGCTCAAAGTCGGGCAACTGCACTGCACAGTGTTGAATCTACTATCACAGAACTTAGTGGGATCTTCACACATTTGGCTACAATGGTTGCCCAGCAAGGGGAACTAGCCATCAGGATTAAATCTATATAA 882 0.4887 MASAFRDRTSEFRSVTETLKKKIGAPTPPPLPNQPENAPSSTDSPVPNSRSEFNRKASRIGLGIHDTSQKIARLAQLAKKSSIFNDPIVEIQEMTAVIKNEITALNAALSDLQTIQNMEIADGMYSEDRVVHSNAVCDDLKSRLMGATKKLQDVLTTRTENIKAHENRKQIFSKNTSRENPFQHHPKPAHVPPPWSNSLNPSEDLQQQSALTSNGVPVGNQLRRRLAVDNAPTPQMEMSMVQQVVPHQDNYAQSRATALHSVESTITELSGIFTHLATMVAQQGELAIRIKSI 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g01183 293 PANTHER SYNTAXIN 50 291 IPR045242 -
Arst7g01183 293 MobiDBLite consensus disorder prediction 37 52 - -
Arst7g01183 293 Gene3D - 48 292 - -
Arst7g01183 293 MobiDBLite consensus disorder prediction 1 52 - -
Arst7g01183 293 MobiDBLite consensus disorder prediction 160 208 - -
Arst7g01183 293 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 249 293 IPR000727 -
Arst7g01183 293 Pfam Syntaxin-5 N-terminal, Sly1p-binding domain 5 21 IPR021538 -
Arst7g01183 293 SUPERFAMILY t-snare proteins 48 290 IPR010989 GO:0016020|GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g01183 Arst-Chr7 10824764 10828627 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g01183 1 290 SNARE and Associated Proteins AT5G05760 64.605 2.17e-116 336
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g01183 K08490 - gmx:100777383 434.876