Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g01171 ATGATAATGATCATCTTCATTATGTTTCTCTTACCTATTGCTTCACAAATAGAGTACATGACATCTGCTGCAGTGACCATGCCCTTGAGTTCAGAGACCGATCAGACGGCTTTGCTTGCTTTGAAGGACAAGCTTACCAATGGAGACTCGGATGCTCTTCCATCATGGAATAAGTCACTCCATTTTTGTGAATGGGAGGGGGTAATATGCAGTCGCCGCCACAAGAGAGTCACATCCTTGCAACTACAAAATCAATATTTGGGTGGCACTCTTGCACCTTCCTTGGGAAATCTAACATTCCTCAGAGAGATGAGTCTTACTAGCATCAATTTACATGGTCAGATTCCAAGAGAAGTTGGTCATTTGAAGAGACTGCAGATTCTTGACTTGAGGCAAAATAATCTTCATGGAGAGATTCCCATAGAGATGATAAATTGTTCAAGCCTTCAAGTAATTATATTGCTATACAATAATCTAACTGGCGAAGTTCCTTCATGGTTTGGTTCTATGATGCAACTGACTCAGCTGGGGCTTGGTGCTAACGGGTTTGCTGGTAGTATACCACCTTCATTGGGAAATCTCTCATCTCTTGAGAAGTTGTCACTTGCATACAATCAATTGGAAGGAAGCATAACTCCAACTTTGGGTAGGTTGTCAACTTTGAAATTTTTGGGTTTGGGTGTAAATAATTTTTCTGGTCAAGTTCCTCCTTCACTTTATAACCTTTCAAATATTCAAGTTCTTGATTTCACGGAAAACCAGTTAGTGGGTAATTTTCTCTCAAATTTACCTATGGCTTTTCCCAATCTTGAGATACTTTTGTGTGGAGGGAACCGATTCACCGGTACTTTTCCGTCTTCAATATCCAACCTTTCTGAGCTGCAACAGTTTCAAATATCCAAAAATGATTTTTATGGACCAATTTCTCCTACCGTAGGAAGTTTACACAAACTCCAGATATTTAATGTTGGACGGAATAGATTCGGAAATGGAAGAGCTCATGATTTGGATTTTCTTTCCTCATTGACTAATTGCACTCAATTGCAGAAATTAGGCTTTTATGAAAATTATTTAGGTGGAGTATTGCCAGATATCATAGGCAACTTATCAACCAATCTCGTTTTGCTTGGTATGGCTTTGAATCAAATATCTGGAAGGATACCAGAAGGAATTGGAAAACTAGTCAACCTAGCAACACTTGATATGGAGGGGAATTTTCTTGAGGGAACAATCCCAGATTCAATAGGAAAGCTAAAAAATCTTGGAGTGTTGTGGTTGGATGGAAATAAGTTCTATGGCAACATCCCTCTTGTCATTGGTAACCTTACTATGCTGTCTGACGTTGATCTGAGCTCAAATAAATTTGAAGGACTCATTCCCTTTACACTTGGATACTGCACCAACATGCAAAAATTTGCTGCATATGGAAACAACTTAAGTGGTAATATACCCAATCAAACATTTGGCAACCAGCAAGGCTTAATACAGTTGTTTCTATACTCCAACTCTTTTACCGGCCCCATTCCTTCTGATCTTGGAAACTTGAACCATCTTTCCATCTTGCATTTACAAGATAACAAGCTCATTGGTGAGATTCCCACGAGACTTAGTGCTTGCTCTGCTTTAACAGAGCTCGTACTAGAAAGAAACTCATTCCATGGAAGTATACCTTCATTCTTGGGATCTCTACTATCCCTTGAAATCTTGGACCTTTCTAATAACAACTTCTCAAGCACAATCCCACATGAACTTGTGAATCTCACGTTTCTGAATACTTTGAACTTATCTTTTAACCATCTCTCTGGTGAGGTCCCGGTAGGAGGGGCATTCAATAATGTCACAGCAATATCACTTGCCGGAAACAAAGATCTTTGTGGTGGGATACCTCAATTGAATCTCCCTGCATGCTCTACGTTGCCCTTACAGAAGAAACACAAGAGATCTGTTAAAAAGAAAGTCATCCTCATAATCGCATTTGGAGGGGTTCTAATATCTGTTGTTGCTTTTATTATTAGTATATATCTTCTCAAGAAGAAGCGAAAAAGGTTATCTACTCCTTCTCTAGCTTTGCAATATGGCTATGTGAAGGTATCTTATGGAGAGCTACATCAAGCGACCAATGGATTTTCTTCTTTAAATTTAATTGGCACAGGAAGCTCTGGCTCAGTATATAGAGGAACCCTTGTCCATTTTGAGAGACCTGTTGCTGTGAAGGTGTTGAATCTTCAAACACGCGGAGCATCGAAGAGTTTCATGTCCGAATGCAAAGCTCTAGGAAAAATGAAGCACAGAAACCTTCTCAATATATTGACCTGTTGTTCAGGTGTTGATTACAAAGGTGATGATTTCAAGGCCATAGTGTTTGAGTTCATGCCTAATGGGAGTTTAGAAAGCTTGTTGCACAACAACATTGAAGATAGCGAGTCCACAAATCGGAGTCTCAACCTGATGCAAAGAGTAAATATTGCTCTTGATGTAGCTTTTGCATTGGATTATCTTCACAATGATTCAGAGGAAGCTGTAGTTCACTGTGATGTTAAGCCAAGTAATGTTCTACTTGATGATGACATTGTTGCTCACTTGGGAGACTTTGGGTTAGCTAGGCTTCTTCATGGGCATGCCACAAGCTATACTAGTAGTAATCAAGCTAGTTCCTCTGTTATTAAGGGAACCATCGGATACCTTCCACCAGAGTATGGAGCAGGTGGATCAGTATCACCACAGGGAGACATCTATAGCTATGGAATTCTTCTTTTAGAAATACTAACCGGAAAGAGACCAACTGATGGCATGTTTGGTGAAGATCTAAGCCTACACAAATTCTGTAAACTGGCAATTCCAGAAGGAATTACTGAGATTGTTGATTCAAGATTGATAACTCTGTTTGATGAAGGAGAAAGAGGGATCACACAACAGAAAAACATGATGGAGTGTTTAGTGTCTTTTGCTAGGATTGGAGTTGCATGTTCTGAAGAGTTTCCCACTCAACGGATGAACATTAAAGATGTCATAATGGAGCTGCATGCAATTAAACACAAACTGCTTCCTTAG 3051 0.3959 MIMIIFIMFLLPIASQIEYMTSAAVTMPLSSETDQTALLALKDKLTNGDSDALPSWNKSLHFCEWEGVICSRRHKRVTSLQLQNQYLGGTLAPSLGNLTFLREMSLTSINLHGQIPREVGHLKRLQILDLRQNNLHGEIPIEMINCSSLQVIILLYNNLTGEVPSWFGSMMQLTQLGLGANGFAGSIPPSLGNLSSLEKLSLAYNQLEGSITPTLGRLSTLKFLGLGVNNFSGQVPPSLYNLSNIQVLDFTENQLVGNFLSNLPMAFPNLEILLCGGNRFTGTFPSSISNLSELQQFQISKNDFYGPISPTVGSLHKLQIFNVGRNRFGNGRAHDLDFLSSLTNCTQLQKLGFYENYLGGVLPDIIGNLSTNLVLLGMALNQISGRIPEGIGKLVNLATLDMEGNFLEGTIPDSIGKLKNLGVLWLDGNKFYGNIPLVIGNLTMLSDVDLSSNKFEGLIPFTLGYCTNMQKFAAYGNNLSGNIPNQTFGNQQGLIQLFLYSNSFTGPIPSDLGNLNHLSILHLQDNKLIGEIPTRLSACSALTELVLERNSFHGSIPSFLGSLLSLEILDLSNNNFSSTIPHELVNLTFLNTLNLSFNHLSGEVPVGGAFNNVTAISLAGNKDLCGGIPQLNLPACSTLPLQKKHKRSVKKKVILIIAFGGVLISVVAFIISIYLLKKKRKRLSTPSLALQYGYVKVSYGELHQATNGFSSLNLIGTGSSGSVYRGTLVHFERPVAVKVLNLQTRGASKSFMSECKALGKMKHRNLLNILTCCSGVDYKGDDFKAIVFEFMPNGSLESLLHNNIEDSESTNRSLNLMQRVNIALDVAFALDYLHNDSEEAVVHCDVKPSNVLLDDDIVAHLGDFGLARLLHGHATSYTSSNQASSSVIKGTIGYLPPEYGAGGSVSPQGDIYSYGILLLEILTGKRPTDGMFGEDLSLHKFCKLAIPEGITEIVDSRLITLFDEGERGITQQKNMMECLVSFARIGVACSEEFPTQRMNIKDVIMELHAIKHKLLP 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g01171 1016 Gene3D Ribonuclease Inhibitor 169 332 IPR032675 -
Arst7g01171 1016 ProSiteProfiles Leucine-rich repeat profile. 565 588 IPR001611 GO:0005515
Arst7g01171 1016 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 791 1016 - -
Arst7g01171 1016 Gene3D Ribonuclease Inhibitor 33 147 IPR032675 -
Arst7g01171 1016 PANTHER RECEPTOR-LIKE PROTEIN 55 404 1011 - -
Arst7g01171 1016 Pfam Protein kinase domain 711 943 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst7g01171 1016 ProSitePatterns Serine/Threonine protein kinases active-site signature. 841 853 IPR008271 GO:0004672|GO:0006468
Arst7g01171 1016 Gene3D Transferase(Phosphotransferase) domain 1 791 1014 - -
Arst7g01171 1016 SMART LRR_typ_2 194 218 IPR003591 -
Arst7g01171 1016 SMART LRR_typ_2 394 418 IPR003591 -
Arst7g01171 1016 SMART LRR_typ_2 122 146 IPR003591 -
Arst7g01171 1016 SMART LRR_typ_2 563 586 IPR003591 -
Arst7g01171 1016 SMART LRR_typ_2 515 539 IPR003591 -
Arst7g01171 1016 SMART LRR_typ_2 442 465 IPR003591 -
Arst7g01171 1016 SMART LRR_typ_2 587 612 IPR003591 -
Arst7g01171 1016 SUPERFAMILY Protein kinase-like (PK-like) 690 1007 IPR011009 -
Arst7g01171 1016 Gene3D Ribonuclease Inhibitor 333 644 IPR032675 -
Arst7g01171 1016 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Arst7g01171 1016 SUPERFAMILY L domain-like 371 626 - -
Arst7g01171 1016 FunFam LRR receptor-like serine/threonine-protein kinase EFR 680 790 - -
Arst7g01171 1016 Pfam Leucine rich repeat 541 600 IPR001611 GO:0005515
Arst7g01171 1016 ProSiteProfiles Protein kinase domain profile. 709 1015 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst7g01171 1016 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 71 336 - -
Arst7g01171 1016 SMART serkin_6 709 1015 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst7g01171 1016 FunFam LRR receptor-like serine/threonine-protein kinase EFR 337 642 - -
Arst7g01171 1016 Gene3D Phosphorylase Kinase; domain 1 670 790 - -
Arst7g01171 1016 ProSitePatterns Protein kinases ATP-binding region signature. 715 738 IPR017441 GO:0005524
Arst7g01171 1016 SUPERFAMILY L domain-like 31 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g01171 Arst-Chr7 10668396 10671826 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g01171 26 1015 Receptor kinase-like Gene Family AT3G47570 44.835 0.0 805
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Arst7g01171 Pkinase 4e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g01171 - - ahf:112766919 1574.68