Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g01138 ATGGAATTCACCTCTTTTTCTTGGGAAATCAATTCCATTGAAGATCCAAGCATACCACAAGACTTGTGTTTCGACGATTGCTTCTCCATCATCTTCAGTTTCACCAAAGAATTGATCCAAATTACTCAACCCACAAGTCCAACCTCTGACTCTGAGGTTGACTTTTCTTCTACAACTCTGGCCAATGAAGCGTTCTTGGTTCCTTCCGATATCCTGTGTAATTGTACTCCCTTCACAGACCTCAATGGAGAAAACACCGCTTTCTTACATGACGTCTTCTCCTCATTGCCTGTATCCCATCAGATATTGGACCAAATTTTACCTGCAATGGGCGAAACCGCAAGAACGATTCGAAGCCATGAAGGTTGTAACTCCAGCATGCCGGAGATTGTTGTGAACCTTTATGTTACTACGCACATTGTTGTAGAAGATTCTGATTTCTATAATGATGATCTTCGTCAAAACGTTCCTGAACTGGCACAACTCGTGAATCTGTTGGAGAGACCCAGAATTGATAAGCAAGAAGATGATGCTGAACAACAATGCGCGATTTGCTTGGAAGAGTTTGGCCAGAGTATTGAAGATTCAAGTGTAGAAGTTGTTCGCACAAATTGCTCGCATGTTTTCCATGAAAGCTGCATATTCCGTTGGCTCCGGCGTTGTGCCGACCGGCAATCGCCCTATTCTTGCCCGTTATGCCGCTGTAGCATATTTCCAACCTCACAGATGGATGACGAATAG 741 0.4372 MEFTSFSWEINSIEDPSIPQDLCFDDCFSIIFSFTKELIQITQPTSPTSDSEVDFSSTTLANEAFLVPSDILCNCTPFTDLNGENTAFLHDVFSSLPVSHQILDQILPAMGETARTIRSHEGCNSSMPEIVVNLYVTTHIVVEDSDFYNDDLRQNVPELAQLVNLLERPRIDKQEDDAEQQCAICLEEFGQSIEDSSVEVVRTNCSHVFHESCIFRWLRRCADRQSPYSCPLCRCSIFPTSQMDDE 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g01138 246 CDD RING-H2 182 234 - -
Arst7g01138 246 Pfam Ring finger domain 181 234 IPR001841 -
Arst7g01138 246 SUPERFAMILY RING/U-box 181 240 - -
Arst7g01138 246 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 146 239 IPR013083 -
Arst7g01138 246 ProSiteProfiles Zinc finger RING-type profile. 182 234 IPR001841 -
Arst7g01138 246 SMART ring_2 182 233 IPR001841 -
Arst7g01138 246 PANTHER RING ZINC FINGER PROTEIN-RELATED 173 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g01138 Arst-Chr7 9860321 9861061 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g01138 172 238 C3H Transcription Factor Family AT5G47610 43.284 2.79e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g01138 - - adu:110273516 486.493