Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g01130 ATGGAGAATGGTGGTGAAATGATCAAGAAAATTAAAGGGAGACAAAAGAGAGAGATAAAGAGGATTGAGAATAAGAAAAACTGTCAAATCGCTTTTACAAAGAGAAAAGACGGTTTACTGAAAAAGGCAAATGAAATAAAATCTTTATGTGATGCTGGTGTTGATTTGATCATATATTCTTCAAGTGGAAAAGTCTATTACTATGGCGATTCTTCTTTAAAGACAATAAAAATGGCTCTCTCAAATGAACAACAACCTCAAAATAGTAATCAGCTCTTTGGTTACATCATGGAGGAAATGTCTAGGAAGGACATGCATAATCTGGTTAAAAAGAACGATTCACTTGTGGATCAATTAAATGCTGAGAAAGAACGAGCTGAAACTCTTTCTAACATTTTAAAGACAATTAAAACTGACAACAGCACCACCAACTGGTGGGATACAATTGGTCAAAGTTGTGAAAAAAATAAAGAATTCGAAAAAATTCTTGTAACTCTCCAGCAGACTTTGAAAAATCAAATTTCACTCAAAATTGTTGCAAATCAGGCTACAGTTACGACTGCAGCTGAGAGTGTGATATCTACATTTTATCACAGTGATCAAACCATAATTCAAGTTAGTCCTGGAGTTATTGGACCATACCGTGCTCATGGAAGTATGAGTACTTTTTCCAACATAACCTTTGCTACCGGTGTCAACCCTTTTGACGCTACGAGAGAATTTGGTAACCAGAATGTCCCTGTTTGGTATCCATCATACCAACACCAACAAGGATATAATGATCTATTTCTCTATGATGCAAGTAACAGGAATGGTGTTGGGAGAAGCAGTGGCGGCGATGACACTAAAAATTATCTTTACCATTCAAATTATAACTATAACAACAATGGTGGAGGCTTTTTTGGTTTTCCATACCATAATAATCCATTTAACAATGGTTATGGCTGCGAAAGATTCTTCTAA 963 0.3541 MENGGEMIKKIKGRQKREIKRIENKKNCQIAFTKRKDGLLKKANEIKSLCDAGVDLIIYSSSGKVYYYGDSSLKTIKMALSNEQQPQNSNQLFGYIMEEMSRKDMHNLVKKNDSLVDQLNAEKERAETLSNILKTIKTDNSTTNWWDTIGQSCEKNKEFEKILVTLQQTLKNQISLKIVANQATVTTAAESVISTFYHSDQTIIQVSPGVIGPYRAHGSMSTFSNITFATGVNPFDATREFGNQNVPVWYPSYQHQQGYNDLFLYDASNRNGVGRSSGGDDTKNYLYHSNYNYNNNGGGFFGFPYHNNPFNNGYGCERFF 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g01130 320 Coils Coil 105 125 - -
Arst7g01130 320 ProSiteProfiles MADS-box domain profile. 12 72 IPR002100 GO:0003677|GO:0046983
Arst7g01130 320 PRINTS MADS domain signature 14 34 IPR002100 GO:0003677|GO:0046983
Arst7g01130 320 PRINTS MADS domain signature 49 70 IPR002100 GO:0003677|GO:0046983
Arst7g01130 320 PRINTS MADS domain signature 34 49 IPR002100 GO:0003677|GO:0046983
Arst7g01130 320 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 21 68 IPR002100 GO:0003677|GO:0046983
Arst7g01130 320 PANTHER MADS BOX PROTEIN 14 172 - -
Arst7g01130 320 SUPERFAMILY SRF-like 13 77 IPR036879 GO:0003677|GO:0046983
Arst7g01130 320 SMART madsneu2 12 71 IPR002100 GO:0003677|GO:0046983
Arst7g01130 320 Gene3D - 24 92 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g01130 Arst-Chr7 9756902 9758485 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g01130 7 147 Type I MADS-box Gene Family AT5G60440 31.293 1.13e-17 80.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Arst7g01130 SRF-TF 4.4e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g01130 - - adu:107457638 611.298