LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst7g01129	GACAAGGCTGACCCACCTCCAGAGGGTCGCTTGCCCGATGCAACAAAGGGTAATGACCATTTGAGGGAGTTGTTTGTGCAAACAATGGGACTCACTGATCAAGATATTGTTGCCCTTTCTGGTGCTCACACCCTTGGTAGGTGCCACAAGGATCGTTCTGGATTTGAGGGTCCTTGGACTTCCAATCCTCTGGTTTTTGACAACTCATACTTCACGGAACTGGTGGGGGGCGAAAGGGAGGGACTTTTGCAGCTCCCAACTGACAAGGCATTGCTGGAGGATCCTGTTTTCCGCCCTCTTGTTGAGAAATATGCCAAAGATGAAGATGCATTCTTTGCTGATTACACTCAAGCTCACTTAAAGCTCTCCGAACTTGGGTACCTACTCTACTTAATTTCTAATCTTATTCTTAATTTTCTTTACACTTCATATATGTGTGTGTAA	444	0.4572	DKADPPPEGRLPDATKGNDHLRELFVQTMGLTDQDIVALSGAHTLGRCHKDRSGFEGPWTSNPLVFDNSYFTELVGGEREGLLQLPTDKALLEDPVFRPLVEKYAKDEDAFFADYTQAHLKLSELGYLLYLISNLILNFLYTSYMCV	147

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst7g01129	147	PRINTS	Plant ascorbate peroxidase signature	77	102	IPR002207	GO:0004601\|GO:0006979\|GO:0020037
	Arst7g01129	147	PRINTS	Plant ascorbate peroxidase signature	10	27	IPR002207	GO:0004601\|GO:0006979\|GO:0020037
	Arst7g01129	147	PRINTS	Plant ascorbate peroxidase signature	29	50	IPR002207	GO:0004601\|GO:0006979\|GO:0020037
	Arst7g01129	147	PRINTS	Plant ascorbate peroxidase signature	51	75	IPR002207	GO:0004601\|GO:0006979\|GO:0020037
	Arst7g01129	147	Pfam	Peroxidase	10	107	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Arst7g01129	147	ProSitePatterns	Peroxidases proximal heme-ligand signature.	35	45	IPR019793	-
	Arst7g01129	147	FunFam	L-ascorbate peroxidase, cytosolic	12	119	-	-
	Arst7g01129	147	ProSiteProfiles	Plant heme peroxidase family profile.	1	147	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Arst7g01129	147	SUPERFAMILY	Heme-dependent peroxidases	1	126	IPR010255	GO:0004601\|GO:0006979\|GO:0020037
	Arst7g01129	147	Gene3D	Peroxidase, domain 2	12	118	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst7g01129	Arst-Chr7	9645638	9646315	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst7g01129	27	122	Peroxidase	AT4G16270	36.090	4.73e-13	63.2

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst7g01129	K00434		-	bvg:104903122	221.09

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