LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst7g01126	ATGAAGATTCCCGCCAACGCCACCGCCGCCATCATCTCCGTCTTGTTCGTCTTCTCCATAATAGCGCCATCCTCGTATGCCCTTGGCTCAGGCACCACTCTCGCTGTAACTGACGCCTCCTCCGCCACCGTCTGCGGCATTGTTGCGGCGTCACAGACCCGCCGAATCCAGTGCTACCGCCGGGGAAGTGGCGGAGCAATTATCCCCGTCTTCCCCGACGTTTCATTCTCTTCAATCTCCGGCGGCCGGAGCTACTTCTGCGCCCTCCGCTCCGGCAACTACAGCCTCCTCTGCTGGAACACCACCACCACCACCAACGCCGCCACCTTCGAAAGCAAGCGACTTTACAACAATGACACTGTTCTATTCGAGAATCTCGCCGTCGGGGACTCCCAGGTTTGCGCCACGGTTGTGGGAACCGGGACGGCGTCGTGTTGGAGAACTGGTAGAAGGAAAGGTTCTGACTTTTCATCTGGGTCGGACCGGTTCGCGTCCATATCATCAGGGTCGGGTTTTTCATGTGGTATTTTGAAGGAAAGTTCTCGAATTCGGTGTTGGGGAAGTAACGCTTCCGTTGCGGATTCCATAGAGAGTGAGTTTCGAAACGTTTCAATGTTGAGCATTGTGGCTGGCGGTTCACACTTGTGTGGTTTGAATTCAACTGGGTTTTTGGTATGTAAAGGAAGTAACAGTTTTGGGCAAATTGAGGTTCCTCATCAAGGTGTTGCTTTTGAGTATTCTGGTTTGGCTCTCGGTGATTCTCATAGTTGTGCTATTAGAAGATCCAATGGTTCTGTTTTTTGTTGGGGTGGCAACGGAATTTTCAATGATAATTTCACAAAAGGTGTGTCTTTTGAGGTTATTGTTTCTGGGTCTGATTTTATCTGTGGATTAACGACAAGAAATTTCTCTGTTTTGTGTTGGGGTCCTGGTTGGTCAAATGGTTCTGATTCTGATTCTGATGTTGTGGTTCCTTTTTTGTCTCCGATTCTTCCGGGTCCTTGTGTTCAATCTTCTTGCAGTGAGTGTGGTATCTATCCTCAATCTCAATACTTGTGTTCTGGTTTTGGTAACATTTGTAAGCCTAAGCCTTGTGGGGCTCAAGTGCCGGTGATGCCGGCTAGGCCTCCTGCGGTGGTGCCATTGCCGGCGGCGGCGCCATCTTCTCGGTCAAAGACCTTGACAACTGGGTTGTTGGCATTTGCCATAGTTGGATCAGTGGGTGCTATTGCTGGAGTTTGCACTCTGCTTTATTGCTTGTGGAATGGTGTTTGTTTAGGGAAGAAGAAAATTCATAATTCTGTTCAACCAACCATTACTAGAGGTGGCAGTTCCAATAATGGTAGGGCCGTTCAATCCAATAGCCCGCTGTCGAGATCAATGACCGTTAGGCGGCAGGGATCGAGGATAATGCGGCGGCAGAGAAGTGGAACCTCGTCGGCTAAACATCCAGACAAGCCTGAGGAGTTCACCCTGGCTGATCTTAGTGCTGCCACCAATAACTTTTCACCCGAAAACAAGATTGGGGCTGGAAGCTTTGGCATTGTGTACCGAGGAAAACTCGCTGATGGACGCGAGGTGGCGATCAAGAGAGGGGAAACAGAATCAGAAACAGGTAATAAGATGAAGAAGTTTCAAGAGAAAGAGAGCGCGTTCGAGTCGGAATTAGCCTCTTTGTCACGACTACACCACAAGCATTTGGTTAGGTTAGTAGGATTCTGTGAAGAAAAAGATGAAAAGCTCTTAGTTTATGAGTACATGAAGAATGGAGCATTGTATGATCATTTGCATGGCAAGAACAATGTGGATAAGAATAGTAGTGTCTTGAATTCTTGGAGAATGAGGATCAAAATCGCATTGGACGCTTCGCGAGGGATTGAGTATCTCCATAATTATGCAGTTCCATCGATAATTCACCGAGATATCAAGTCTTCCAATATCCTTATTGATGCCACTTGGACAGCAAGAGTATCCGATTTCGGATTGTCATTGATGAGTCCGGAACCTGATACTGATTTCCGGCCAACAAAGGCAGCCGGAACAGTCGGATACATCGATCCTGAGTCCTATGGTCTAAATGTATTGACAACAAAGAGTGATGTCTATGGTCTTGGAGTGGTGTTGCTAGAACTCTTAACCGGAAAGCGAGCCATATTCAAAATCGACGAAACTTCAGGCACCCCGGTGAGCTTAGTGGACTTTGCCGTGCCTGCGATTAAGGTCGGGGAATTGGCGAAAATTTTGGACCCAAGGGTTGCGCCGCCTGAGTTGAATGAAATGGAAGCTCTGGAGCTTGTGGCCTATACTGCCATGCATTGTGTGAATTTGGAGGGAAAGGATAGACCAACAATGGCTGACATTGTGGCAAATTTGGAGCGCGCTTTATCCCTTTGTGAAAGTAGTAGCCATGGCAGCATTTCCAGTGGTACAATCTCTGTTGTATCAGACTAA	2451	0.4802	MKIPANATAAIISVLFVFSIIAPSSYALGSGTTLAVTDASSATVCGIVAASQTRRIQCYRRGSGGAIIPVFPDVSFSSISGGRSYFCALRSGNYSLLCWNTTTTTNAATFESKRLYNNDTVLFENLAVGDSQVCATVVGTGTASCWRTGRRKGSDFSSGSDRFASISSGSGFSCGILKESSRIRCWGSNASVADSIESEFRNVSMLSIVAGGSHLCGLNSTGFLVCKGSNSFGQIEVPHQGVAFEYSGLALGDSHSCAIRRSNGSVFCWGGNGIFNDNFTKGVSFEVIVSGSDFICGLTTRNFSVLCWGPGWSNGSDSDSDVVVPFLSPILPGPCVQSSCSECGIYPQSQYLCSGFGNICKPKPCGAQVPVMPARPPAVVPLPAAAPSSRSKTLTTGLLAFAIVGSVGAIAGVCTLLYCLWNGVCLGKKKIHNSVQPTITRGGSSNNGRAVQSNSPLSRSMTVRRQGSRIMRRQRSGTSSAKHPDKPEEFTLADLSAATNNFSPENKIGAGSFGIVYRGKLADGREVAIKRGETESETGNKMKKFQEKESAFESELASLSRLHHKHLVRLVGFCEEKDEKLLVYEYMKNGALYDHLHGKNNVDKNSSVLNSWRMRIKIALDASRGIEYLHNYAVPSIIHRDIKSSNILIDATWTARVSDFGLSLMSPEPDTDFRPTKAAGTVGYIDPESYGLNVLTTKSDVYGLGVVLLELLTGKRAIFKIDETSGTPVSLVDFAVPAIKVGELAKILDPRVAPPELNEMEALELVAYTAMHCVNLEGKDRPTMADIVANLERALSLCESSSHGSISSGTISVVSD	816

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst7g01126	816	PANTHER	SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4	192	802	IPR044815	GO:0004674
	Arst7g01126	816	SUPERFAMILY	RCC1/BLIP-II	246	335	IPR009091	-
	Arst7g01126	816	MobiDBLite	consensus disorder prediction	437	488	-	-
	Arst7g01126	816	ProSiteProfiles	Protein kinase domain profile.	502	795	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst7g01126	816	SUPERFAMILY	RCC1/BLIP-II	17	273	IPR009091	-
	Arst7g01126	816	Gene3D	-	23	189	IPR009091	-
	Arst7g01126	816	Pfam	Protein kinase domain	504	788	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst7g01126	816	Gene3D	Phosphorylase Kinase; domain 1	463	586	-	-
	Arst7g01126	816	SMART	serkin_6	502	795	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst7g01126	816	Gene3D	Transferase(Phosphotransferase) domain 1	587	806	-	-
	Arst7g01126	816	ProSitePatterns	Protein kinases ATP-binding region signature.	508	530	IPR017441	GO:0005524
	Arst7g01126	816	FunFam	Serine/threonine-protein kinase-like protein CCR4	587	808	-	-
	Arst7g01126	816	FunFam	receptor-like protein kinase FERONIA	465	586	-	-
	Arst7g01126	816	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	637	649	IPR008271	GO:0004672\|GO:0006468
	Arst7g01126	816	SUPERFAMILY	Protein kinase-like (PK-like)	480	791	IPR011009	-
	Arst7g01126	816	Gene3D	-	201	343	IPR009091	-
	Arst7g01126	816	Pfam	Regulator of chromosome condensation (RCC1) repeat	250	273	-	-
	Arst7g01126	816	MobiDBLite	consensus disorder prediction	437	465	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst7g01126	Arst-Chr7	9599233	9602282	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst7g01126	15	816	Receptor kinase-like Gene Family	AT3G55950	58.617	0.0	835

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CR4L	Arst7g01126		Pkinase	4.6e-43	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst7g01126	-		-	gmx:100798905	1097.8