Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g01101 ATGCCCCAAACTAAATCATCCAAAAGAAAAGCGCTGTTCAAGGTTGCGATGATGATCCAAGACAACACCAAATTTGACGAAGAAGCAGATCGAATCAAGGGGTCATGGACTCCTCAAGAGGATGCAACGCTTCTGAAGCTGGTGGCGCAGCACGGAGCACGGAACTGGTCCGTCATAAGCAACGGGATACCGGGCCGATCGGGAAAGTCATGCCGACTGCGGTGGTGCAACCAGCTCAGCCCCGACGTTCAGCACCGACCGTTCACCCCTGCGGAGGACGAAATCATCCTTAAGGCTCACGCCGTACACGGCAACAAGTGGGCCACCATCTCCAGACTCCTTCCTGGCCGCACCGACAACGCTATCAAGAACCACTGGAACTCCACCCTCCGCCGCCGTAAAGGTGTAACCGTCGCCTTTTCCGGCGCCGGATTCCCCTCCGCGGCAGCCACCGACGCCTCCACCAGCGGAGGATTATCCGGATTCTCTTCTGCCGCCACGTCGTCGTCATCAGATTTCAGTCCAACATTTGTTTGCCAAAAGCGCAAGGGCGAGCAGTTAGAGTTGCCACAGAATTTCATGAAGAAGCCATGTTTGGCGGCAGTTGCCGTCGACAGTCACGCGGAGGAGGAGGTTCGCCAAAAGCGGAAGGCCGAAGAAGAAGAAGAAGGCGGCGTGACGACACTGAGTTTGCTCCCGCCCGGAGAGAAGCCTTTGGGCGCAGAGGGAGTGTGGCGGAAGGAGGAGGAAGTCAATCCGTACGGCGAGCATGCATGGTTGATGAAGATGATGCGGCCCATGATAGCAGAAGAGGTTAGGAGATACATTCAAAGCTTACAAAAGGCTCAACCACTCTTTGACCCTGATCCACCTAGTAAAAATTTTTAA 888 0.5518 MPQTKSSKRKALFKVAMMIQDNTKFDEEADRIKGSWTPQEDATLLKLVAQHGARNWSVISNGIPGRSGKSCRLRWCNQLSPDVQHRPFTPAEDEIILKAHAVHGNKWATISRLLPGRTDNAIKNHWNSTLRRRKGVTVAFSGAGFPSAAATDASTSGGLSGFSSAATSSSSDFSPTFVCQKRKGEQLELPQNFMKKPCLAAVAVDSHAEEEVRQKRKAEEEEEGGVTTLSLLPPGEKPLGAEGVWRKEEEVNPYGEHAWLMKMMRPMIAEEVRRYIQSLQKAQPLFDPDPPSKNF 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g01101 295 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 28 79 IPR017930 -
Arst7g01101 295 MobiDBLite consensus disorder prediction 210 224 - -
Arst7g01101 295 Pfam Myb-like DNA-binding domain 33 79 IPR001005 -
Arst7g01101 295 Pfam Myb-like DNA-binding domain 87 129 IPR001005 -
Arst7g01101 295 SUPERFAMILY Homeodomain-like 30 126 IPR009057 -
Arst7g01101 295 CDD SANT 35 77 IPR001005 -
Arst7g01101 295 FunFam Transcription factor MYB44 87 133 - -
Arst7g01101 295 CDD SANT 87 130 IPR001005 -
Arst7g01101 295 SMART sant 84 132 IPR001005 -
Arst7g01101 295 SMART sant 32 81 IPR001005 -
Arst7g01101 295 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 80 134 IPR017930 -
Arst7g01101 295 ProSiteProfiles Myb-like domain profile. 80 130 IPR001005 -
Arst7g01101 295 PANTHER MYB PROTEIN-RELATED 33 188 - -
Arst7g01101 295 Gene3D - 87 133 - -
Arst7g01101 295 MobiDBLite consensus disorder prediction 150 175 - -
Arst7g01101 295 FunFam MYB transcription factor 33 84 - -
Arst7g01101 295 Gene3D - 32 84 - -
Arst7g01101 295 ProSiteProfiles Myb-like domain profile. 28 79 IPR001005 -
Arst7g01101 295 MobiDBLite consensus disorder prediction 210 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g01101 Arst-Chr7 9181557 9182791 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g01101 30 174 MYB Transcription Factor Family AT4G37260 57.325 2.68e-53 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Arst7g01101 Myb_DNA-binding 7e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g01101 - - adu:107457624 561.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst7g01101 7 9181557 9182791 Arst7g01101 7 9181557 9182791 ECH