Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g01100 CACCACCACCACCACCACCGTGGCGTCTCTCTCCGCCATTACTCCAGCACCATGTCGGCGCCCAACCACGACTATCACAAATTCGACTGGCACTTCAACACGGAGCTCGAGGACGAGACCATCGAACTCCGAGGCCGGAGGCTCATCTTTGTTATCGTCCTCTTCGTCATTATCCTCATCACCACCGCCTTCTTCGTCTACCTCCGCTGGATCTGCCGCTCCCGCGGCCTCATCCCGGTCACATCGATCCACCTCCGCCACCAGTTGCCGCCGCACACTCAACCTCAGTCCAACGGCCTGGACGCGGCCACCATCAAGAAACTCCCGATCGTGCTCTACCAGGCGCCGCCAACTGCGTCTGCGACAGATCTGAACCGCGGCGGTGCGTTGGAATGCTGCATATGCCTGAGCGCGTTCCGCGACGGAGAGAAGCTGAAGACTCTTCCCGGTTGCAAGCACCGATTCCACTGCGAGTGCGTAGACAAGTGGCTCACGAATCACTCGAGTTGCCCGTTGTGCAGAGCTTCTCTCAAGCTCGCTCCTCCATTACCGAGGATTTTGTATCCAGAACCTCCCATTAGAATCACTATTAACAATGAAGAACAATGA 609 0.5747 MESDLHRHPPMFLDHHHHHHHRGVSLRHYSSTMSAPNHDYHKFDWHFNTELEDETIELRGRRLIFVIVLFVIILITTAFFVYLRWICRSRGLIPVTSIHLRHQLPPHTQPQSNGLDAATIKKLPIVLYQAPPTASATDLNRGGALECCICLSAFRDGEKLKTLPGCKHRFHCECVDKWLTNHSSCPLCRASLKLAPPLPRILYPEPPIRITINNEEQ 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g01100 217 Pfam Ring finger domain 146 189 IPR001841 -
Arst7g01100 217 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 101 194 IPR013083 -
Arst7g01100 217 PANTHER RING FINGER DOMAIN-CONTAINING 52 192 - -
Arst7g01100 217 SMART ring_2 147 188 IPR001841 -
Arst7g01100 217 FunFam RING-H2 finger protein ATL66 107 194 - -
Arst7g01100 217 SUPERFAMILY RING/U-box 125 196 - -
Arst7g01100 217 CDD RING-H2_EL5-like 146 189 - -
Arst7g01100 217 ProSiteProfiles Zinc finger RING-type profile. 147 189 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g01100 Arst-Chr7 9116050 9116682 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g01100 45 194 C3H Transcription Factor Family AT3G11110 37.748 1.87e-28 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g01100 - - adu:107496923 427.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g01369 10 20879235 20880538 Arst7g01100 7 9116050 9116682 PCT