Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g01096 ATGGATTGTGATGCTCTTACTCTATCCACTATGACTATCTCTTCACCAGGATTGTTACCAACTGAGACATTATTAGATTCTTTGGTTCACATATCCAATGAAGTTGTCTCAATAGAGAAGCTTCCATTTGTGCAAATGAGGAATGTCTCATCCATGATAAGGAGGATCAAGCTTCTCTCTTCATTGTTTGAAGAGATTCAAGAGGCAGAAACACCACTCCCTCCTTCTTCAACTCTTTGCTTCACTGAGCTTTTATCAGTGATCACAAGGGGTAAGGTTTTGATCCAAGAAATCAAAGATGCAAGCACCCTTTGGGGCCTGATTCAGTTAGAATTCATCTCAAACCAATTCTATGTTCTTGTTAAAGAGATGGGAAGAGCCCTTGATATCTTGCCTCTTAGATTGCTCAACATAACTGCAGATATAAGGGAGCAAGTGGATCTTCTTCACAAACAAGCGAAGCGAGCCGAGTTAACCATTGATCCTAGAGAGCTCCAAAGAAGAGAAATGCTTCTAGAAGTAATGGCCAACAACATGATGCAAAACAAGAAGAACAAGGGCTATATGGATTTTGGTAAAATGGAAGAACTGTTAAGTAGCATTGGTTTGAGAACTATATCAGATTATGATATAGAAATTTCAAAGTTGGAGATTGAAGCTCAGAATCAAGCAGGAACAGGAGGACTAGTGGTTGTGTCAAACATAAACAACCTCATATCTCTTGTTTCTTATTCCAAATCAATGATTTTCAGAGATGGAGAAAATGAAGAAAGTAAGAAAGAATCTTGTTCATATTTGTACAACAAAGTCAATGATAGTTCTTCATCTTCTCAATCCATGTCAATTCCTGACGAATTTCGCTGCCCAATTTCACTTGACTTAATGAGAGATCCTGTGATTGTTTCATCCGGCCACACATATGATCGAAATTCGATTGCGCAGTGGATAAACTCTGGCCACCATACTTGCCCCAAAAGTGGACAGAGGCTAATCCACACTGCTCTGATACCAAACTATGCACTGAAAAGTCTTGTTCAGCAATGGTGCTATGACAACAATGTTCCATTGAATGAGCCTAATTCTTCAGTTTCCGAGGAAAAGAGCAATAAGAAGAACTCAAATGACGGCGCTATTGATCACATCTCTGCCAACAAAGCGGCTGCAGATGCTGTGAAAATGACAGCAGAGTTTCTGGTTGGAAAATTGGCAACAGGCTCAGCTGACACACAAAGACAAGCTGCCTATGAGCTTCGTTTGCTCGCGAAAACCGGCATGGACAACCGGCGAATCATAGCTGAGGTAGGTGCTATTCCTTTTCTGGTAACACTACTTGGATCACATGATCCAAGAATCCAGGAACATGCAGTGACTGCCATGTTCAACCTATCAATCTATGATAACAACAAGGTTCTGCTCATGTCGGCCGGCGCAGTGGACAAAATAGTCCAAGTTCTAGAACAAGGGAGAACAATGGAAGCCAGAGAGAATGCTGCAGCAACAATATTCAGCTTGAGTATGTTAGATGACTGCAAGGTTCAAATCGGAGCGCGGCCGAGGGCGGTTCCTGCATTAGTCCTCCTCTTGAAAGAAGGCACACCAATTGGGAAAAGAGATGCAGCAACTGCACTATTCAATCTTGCAGTTTACAATCCAAACAAATCAATAATTGTGAGTTCTGGTGCAGTTGATGTGCTTATTGAATTGCTAATGGATGATAAAGCTAGCATTACTGATGATGCATTATCAGTTCTTGCTTTGTTACTTGGATGCTCACAAGGACTAAAAGAAATAAGGAATAGTAGAGAGCTGGTGCCACTTCTCATTGATCTTCTAAGATTTGGATCAGTCAAAGGGAAGGAAAATTCTATAACACTTCTTCTAGGATTGTGCAAGGAAGAGACTGAGGTGGTTGCGCGGCGGTTGCTGGCGAATCCAAGGAGCGTGCCGTCGCTTCAAAGCTTGGCTGCTCATGGTTCATTGAGAGCTAGAAGGAAGGCTGATGCATTGTTAAGGTTGCTCAATAGATGTTGCTCTCAGCCTCATCATTCTCTTTGA 2055 0.418 MDCDALTLSTMTISSPGLLPTETLLDSLVHISNEVVSIEKLPFVQMRNVSSMIRRIKLLSSLFEEIQEAETPLPPSSTLCFTELLSVITRGKVLIQEIKDASTLWGLIQLEFISNQFYVLVKEMGRALDILPLRLLNITADIREQVDLLHKQAKRAELTIDPRELQRREMLLEVMANNMMQNKKNKGYMDFGKMEELLSSIGLRTISDYDIEISKLEIEAQNQAGTGGLVVVSNINNLISLVSYSKSMIFRDGENEESKKESCSYLYNKVNDSSSSSQSMSIPDEFRCPISLDLMRDPVIVSSGHTYDRNSIAQWINSGHHTCPKSGQRLIHTALIPNYALKSLVQQWCYDNNVPLNEPNSSVSEEKSNKKNSNDGAIDHISANKAAADAVKMTAEFLVGKLATGSADTQRQAAYELRLLAKTGMDNRRIIAEVGAIPFLVTLLGSHDPRIQEHAVTAMFNLSIYDNNKVLLMSAGAVDKIVQVLEQGRTMEARENAAATIFSLSMLDDCKVQIGARPRAVPALVLLLKEGTPIGKRDAATALFNLAVYNPNKSIIVSSGAVDVLIELLMDDKASITDDALSVLALLLGCSQGLKEIRNSRELVPLLIDLLRFGSVKGKENSITLLLGLCKEETEVVARRLLANPRSVPSLQSLAAHGSLRARRKADALLRLLNRCCSQPHHSL 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g01096 684 ProSiteProfiles U-box domain profile. 281 355 IPR003613 GO:0004842|GO:0016567
Arst7g01096 684 SUPERFAMILY ARM repeat 395 673 IPR016024 -
Arst7g01096 684 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 264 367 IPR013083 -
Arst7g01096 684 MobiDBLite consensus disorder prediction 358 378 - -
Arst7g01096 684 FunFam RING-type E3 ubiquitin transferase 490 677 - -
Arst7g01096 684 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 435 477 IPR000225 GO:0005515
Arst7g01096 684 CDD RING-Ubox_PUB 283 335 IPR045210 -
Arst7g01096 684 FunFam RING-type E3 ubiquitin transferase 281 355 - -
Arst7g01096 684 SMART Ubox_2 285 348 IPR003613 GO:0004842|GO:0016567
Arst7g01096 684 SMART arm_5 590 631 IPR000225 GO:0005515
Arst7g01096 684 SMART arm_5 465 506 IPR000225 GO:0005515
Arst7g01096 684 SMART arm_5 424 464 IPR000225 GO:0005515
Arst7g01096 684 SMART arm_5 549 589 IPR000225 GO:0005515
Arst7g01096 684 SMART arm_5 510 548 IPR000225 GO:0005515
Arst7g01096 684 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 519 561 IPR000225 GO:0005515
Arst7g01096 684 SUPERFAMILY RING/U-box 272 356 - -
Arst7g01096 684 Pfam Armadillo/beta-catenin-like repeat 550 585 IPR000225 GO:0005515
Arst7g01096 684 Pfam Armadillo/beta-catenin-like repeat 426 463 IPR000225 GO:0005515
Arst7g01096 684 Gene3D - 375 491 IPR011989 -
Arst7g01096 684 Gene3D - 492 676 IPR011989 -
Arst7g01096 684 Pfam U-box domain 282 352 IPR003613 GO:0004842|GO:0016567
Arst7g01096 684 PANTHER U BOX DOMAIN-CONTAINING 46 678 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g01096 Arst-Chr7 8988910 8991104 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g01096 27 679 U-box Gene Family AT3G46510 37.195 7.24e-128 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g01096 - - gmx:100793498 1034.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst7g01096 7 8988910 8991104 Arst7g01096 7 8988910 8991104 ECH