Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g01079 ATGGGTGGGAATTCACCGTGTGCCTCATGCAAGCTTCTGAGACGCAGGTGCACCAAAGATTGTGCATTTGCTCCTTATTTCCCTGCTGATGAACCCCACAAGTTTGCCATAGTCCACAAAGTTTTTGGCGCTAGCAACGTTAGCAAAATGTTGCAGGAACTTCCGGTGGAGCAAAGAGCAGATGCAGTGAGCAGCCTAGTGTACGAGGCGAATGCGAGGGTCCGGGATCCGGTGTACGGGTGTGTCGGAGCCATATCATACCTTCAAAACCAAGTCTCAGAGCTTCAAATGCAGCTAGCAGTTGCTCAAGCAGAGATACTCTGCATCCAGATGCAGCAGCAAGTAGAAGAAGATCCACCAGTGATGATGATGATGATGCCACCACCTCAACTCTCAAATGAAAATGAACTCTCTCATCATCACTACTTCACTACTTTTGGATCTTCTTCTACCAATAATGTAATTCATGATTCCTTCAAGAGACAAAATGTTTTTGGACATGACATGGTTTCTTGA 516 0.4612 MGGNSPCASCKLLRRRCTKDCAFAPYFPADEPHKFAIVHKVFGASNVSKMLQELPVEQRADAVSSLVYEANARVRDPVYGCVGAISYLQNQVSELQMQLAVAQAEILCIQMQQQVEEDPPVMMMMMPPPQLSNENELSHHHYFTTFGSSSTNNVIHDSFKRQNVFGHDMVS 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g01079 171 Coils Coil 85 105 - -
Arst7g01079 171 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 132 - -
Arst7g01079 171 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
Arst7g01079 171 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g01079 Arst-Chr7 8862876 8864119 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g01079 3 114 AS2 family AT2G30130 90.179 3.91e-72 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Arst7g01079 LOB 8.3e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g01079 - - cit:102614863 255.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst7g01079 7 8862876 8864119 Arst7g01079 7 8862876 8864119 ECH