Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g01071 ATGGTAGGAAAAAGGAAGTATTTGCATCAATCCAAGCATCCATTCAATGCTTACCCCTTTGAAGCATGTGTGTATGGTTCATGGAAAGCGGTGGAGTTCATAAAAATTGAGTATGGAGTTATGTCCATACATTTCATTGATAAACGCCATATTTCTATGGAAAAAGGCCCCTCTGCAGACGTTCGGATAAGGTCGAGAATAGCTACTACTGCAGATTGCTCCTGCATTTTACGACGGGGAATTGATGTATGTGTGCTATCATCTCCTCAAGGAACTGGTGATTCGGATGAATTTGGTGCTCGTGAGCCTGTTTGGAGAGATGCTAGAATTAGTTCTATACAGAGAAAGCCCCATGATTCTGAGTGCACATGCCAATTTTATGTCAACTACTATGTTAATCAAGGTTCGCTTGGTGCAGAGATGAAAACGCTTAACAAGGATATTAATGTGGTTGGATTAGATCATGTCTTCATCCTCCAAAGGCTTGAACATACACACTGTGATGAAGATCAGCACTATCGGTGGACTTCAACAGAGGACTGCTCTAGAATACCACAAACTAGATTGCTGTTGGGGAAATTTTTACCTGATATTTCGTGGTTGATCGCGACATCTGTTTTAAAGAAGGTTTCTTTCTTTATAAGATCTGTGGAAAACAAGCTTGTTTATGAAGTTCTGTCAAATGACATTGTTATCCCTCCGTTCCATACCGAGTCTCATATAAATGTTGTAAACTTCAAACTGGAGAAAGACATGCTAATACCTATTGTTTCTCAAGTTATTGTATCCAGAACTGAGAGGGTTGACTATGAACATCAAGAATCCCATGAAGATGAAGTGTCACCATCATCATATAATGTTCAAGGCTTGCGGCGTTCCAAGCGCCGACATGTACAACCTGACCGTTACCTTGGTTGCAATAGTGCTCCTGAGCTCAATATTGGTACTATTAGAACAAGGCCATACAAATTAGGCACATGGGAACAAGTTGATGAAGATCATGAACTGTCAATGCCATTATCTTCCCTGTTTGGATTGAAACAAATCAGTCAAGATCAGGATCTTGATAGTAGTCCTAAGGAGGACAAGGTGAACGGTTGCCAGGAGATTATAGTGTACAATAGGAGGGCTAAAGCCAAGGAGGCGAAGACAGGCGATGCTGATCGAGACATACAGCTCAATGAACTTGCTATTATTCCTCATCCTACTCTTAAACATCATAAGCTCAATGACATGAATTGTAGAATTGGCAAACAAGAACCAGACGAAACTCCTTCGAAATATAGTCATCTGGTTAATACCACTAAGCAGAGAAGGAATAGTGTCAATCTGTTGAATTTCAATCCAGATAATGTGCTTGCGCAGTTAGAGGAGGTGGAGAAAAGTGATGGTTTTTCTTCAAGATTGCATTATACTTATAGTTACAGCACCTCCAAGTTTCAGAGGAAGGCTTTAAGTGATCTTGATGATATGAATCTTGCACCAAAATGGGAAGGCATACATTCCAGTAAGGGAGCTCAAGATAGAAGGTACCGTCCGGCATTTTCGAGAAATAGACATCCTGATGAAGAGAGAACTTATAAAGACAGAACATTGAATGCCACAGCCTACAAGGAGTTGATAAATTCCTACTTAAAGAATATTAACACGAAACCAACGAAAGAAGAAATGCCTATTAGCGACCAGTGGAAGCAGTTCCAGGATTCGCGCAGTGTCGGGAAAACGAAGGAAATACAAATATCCGATACCGATTATGCAGAAGAAACCTCTGAGTTGGATAATTTGTGGAGAGAAATGGAAGTGTCTCTGGCATCAAGTTACATTGAAGACACAGAGGAAGCGAATGCAGCCAATCTTTTCGACACTCAGGAAAAATCAAAGGAAGCTTGTGAACATTACTTTAGATTGGATGATGAAATTGGAATTTGCTGCAAGAAATGTGGCTTTGTGGAGATGGACATTAAAGCTATCACACCAGCCTTTCTTCAACATTCAGTGTGGCACCAAGAGGAGAGGCAGAACGACGGCAAAGAAGATGCAGAATCGAAGTCTGCTGAATTTGAAGATTTCAATCTTGTCTCAAATGTTGAGAATGAAGATGAACCTGTATCAGTGGAACATGATAATGTGTGGGCATTAATTCCGGATCTTCGAAAGAAGTTGCACCTCCACCAAAAGAAAGCTTTTGAGTTTCTTTGGAGAAACATTGCCGGGTCTACAGAACCAGCACTTATGGACAAGAACTCCAGAAAAAGAGGTGGCTGTGTGATATCTCATACTCCGGGAGCCGGAAAAACTTTCCTGATTATTGCTTTTCTAGTTAGCTACTTGAAGTTATTCCCTGGAAAGAAACCTCTAGTCCTTGCACCAAAAACAACACTTTATACCTGGTATAAAGAATTTATCAAGTGGGAGATTCCAATACCGGTGTATCTAATTCATGGTCGAAGAACCTACAGGGTATTCAACCAGAAACAATCAATGGTTTTTCCCGGAATGCCAAAGCCGACGGAGGATGTCAAGCATGTTTTAGATTGCCTAGAGAAAATACAGAAGTGGCATTCACACCCAAGTGTTCTAATCATGGGATATACTTCATTTTTGACATTGATGCGAGAGGATTCAAAGTATGCACATAGAAAGTATATGGCTAAAGTTCTGAGGGAAAGTCCCGGACTCCTAGTATTGGATGAAGGGCACAATCCGAGAAGCACCAAGTCCAGGTTGAGGAAAGTTTTGATGAAGGTACAAACAGAATTAAGAATACTGCTGTCTGGCACATTGTTTCAGAACAATTTCTGTGAATACTTCAACACTCTCTTGTTGGCAAGACCAAAGTTTGCACATGAGGTGCTGAAAGTATTAGACCCGAAATACAAGAAGAAGAAAGGAAAAGTGAGGGCAGTGGAGTACCGGGCAAGGAAATTCTTCATAGAAGTGATCTCTAGGAAAATCGACTCGAACAATGGCGAGGAGAGGATGCAAGGTCTTAACATGTTGAGAAATTTAACAAATGGTTTTATAGATGTTTATGAAGGTAGTAGCTCGGACGACCTACCCGGTTTGCAAATTTATACTTTGTTGATGAACACAACCGATATGCAGCATGAGATGTTGAAGAGACTGCACAAGAAAATGCAAAAGTGCAATGGATATCCTCTGGAGTTAGAGCTTTTGATAACTCTTGGGTCCATACATCCTTGGTTAATCAAAACTGCTGTATGTGCTAACAAGTTTTTCACAATGGAGGAACTAAGGGAGCTAGAGAAATGCAAGTTTGATTTGAAGATGGGGTCTAAGGTAAAATTTGTTATGAGTCTTATCTATCGCGTGGTCCAGAAGGAGAAGATCCTCATCTTCTGCCACAACATTGCACCAGTGAAGTTATTTATAGAATATTTTGAGTTGTTCTTCAAATGGCAAAAAGGGCGGGAAATTCTGGTGTTAACCGGGGAGCTAGAGCTCTTCGAGCGCGGCAGAGTGATGGATAAGTTTGAGGAACCTGGTGGAGTTTCAAAGATACTCCTTGCTTCGATTACAGCTTGTGCCGAAGGCATTAGTTTGACGGCAGCTTCTCGGGTGATCATGCTGGATTCCGAGTGGAATCCGTCGAAAACAAAGCAGGCCATCGCAAGGGCTTTTCGTCCCGGCCAGCGG 3657 0.4132 MVGKRKYLHQSKHPFNAYPFEACVYGSWKAVEFIKIEYGVMSIHFIDKRHISMEKGPSADVRIRSRIATTADCSCILRRGIDVCVLSSPQGTGDSDEFGAREPVWRDARISSIQRKPHDSECTCQFYVNYYVNQGSLGAEMKTLNKDINVVGLDHVFILQRLEHTHCDEDQHYRWTSTEDCSRIPQTRLLLGKFLPDISWLIATSVLKKVSFFIRSVENKLVYEVLSNDIVIPPFHTESHINVVNFKLEKDMLIPIVSQVIVSRTERVDYEHQESHEDEVSPSSYNVQGLRRSKRRHVQPDRYLGCNSAPELNIGTIRTRPYKLGTWEQVDEDHELSMPLSSLFGLKQISQDQDLDSSPKEDKVNGCQEIIVYNRRAKAKEAKTGDADRDIQLNELAIIPHPTLKHHKLNDMNCRIGKQEPDETPSKYSHLVNTTKQRRNSVNLLNFNPDNVLAQLEEVEKSDGFSSRLHYTYSYSTSKFQRKALSDLDDMNLAPKWEGIHSSKGAQDRRYRPAFSRNRHPDEERTYKDRTLNATAYKELINSYLKNINTKPTKEEMPISDQWKQFQDSRSVGKTKEIQISDTDYAEETSELDNLWREMEVSLASSYIEDTEEANAANLFDTQEKSKEACEHYFRLDDEIGICCKKCGFVEMDIKAITPAFLQHSVWHQEERQNDGKEDAESKSAEFEDFNLVSNVENEDEPVSVEHDNVWALIPDLRKKLHLHQKKAFEFLWRNIAGSTEPALMDKNSRKRGGCVISHTPGAGKTFLIIAFLVSYLKLFPGKKPLVLAPKTTLYTWYKEFIKWEIPIPVYLIHGRRTYRVFNQKQSMVFPGMPKPTEDVKHVLDCLEKIQKWHSHPSVLIMGYTSFLTLMREDSKYAHRKYMAKVLRESPGLLVLDEGHNPRSTKSRLRKVLMKVQTELRILLSGTLFQNNFCEYFNTLLLARPKFAHEVLKVLDPKYKKKKGKVRAVEYRARKFFIEVISRKIDSNNGEERMQGLNMLRNLTNGFIDVYEGSSSDDLPGLQIYTLLMNTTDMQHEMLKRLHKKMQKCNGYPLELELLITLGSIHPWLIKTAVCANKFFTMEELRELEKCKFDLKMGSKVKFVMSLIYRVVQKEKILIFCHNIAPVKLFIEYFELFFKWQKGREILVLTGELELFERGRVMDKFEEPGGVSKILLASITACAEGISLTAASRVIMLDSEWNPSKTKQAIARAFRPGQR 1219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g01071 1219 SMART ultradead3 717 955 IPR014001 -
Arst7g01071 1219 Pfam Helicase conserved C-terminal domain 1100 1216 IPR001650 -
Arst7g01071 1219 Gene3D - 688 976 IPR038718 -
Arst7g01071 1219 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 686 948 IPR027417 -
Arst7g01071 1219 SMART helicmild6 1132 1217 IPR001650 -
Arst7g01071 1219 Pfam SNF2-related domain 726 956 IPR000330 GO:0005524|GO:0140658
Arst7g01071 1219 CDD SF2_C_SNF 1092 1219 - -
Arst7g01071 1219 MobiDBLite consensus disorder prediction 271 292 - -
Arst7g01071 1219 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 891 1218 IPR027417 -
Arst7g01071 1219 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 746 946 IPR014001 -
Arst7g01071 1219 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 53 1218 IPR044567 GO:0080188
Arst7g01071 1219 CDD DEXHc_ATRX-like 721 947 - -
Arst7g01071 1219 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1103 1219 IPR001650 -
Arst7g01071 1219 Gene3D - 1020 1219 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g01071 Arst-Chr7 8774320 8780155 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g01071 1143 1219 RAD5 or RAD16-like Gene Family AT5G05130 43.750 4.84e-09 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Arst7g01071 SNF2_N 1.4e-16 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g01071 K10875 - gmx:100811703 1600.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst7g01071 7 8774320 8780155 Arst7g01071 7 8774320 8780155 ECH