Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g00965 ATGGAAAACTCAGACCACAACGAACCCGAAAAGAAGAGGCCTCACCTCACTTCCGTTTCTTCTCGCGTGGCGCGAAACTCTCCATCGAACAACAAAACCGCTGATGCTGGAGTCTTACAAGCACAGAACCAGCAGCTCGTTCAAAAGATTGACATCCAAAAGCGTGCTTTGCATGACCTTGAAGAAAAAATTAGAGAGTTAAAAGAGCGGCAAAATACCCATGATGATTTGTTAATTGCAGTGAACCAATGTTGGATTCAGTTGTCTGATGATCTGACTCTTCTTGGTGTACGAGCTGGTAGAAGCAAAGATGCATTACAAACACTAGATTACCATAATAACCGTCAAGGTTCACTTCCTTCATGCCCTGCGGAGGATATATTTCTGTGTAGATTGATCCAGAAAGATTCTGTTGGTGGAAACAGTATTGGTGAGAGAATTAATTATGTTGAAGAAAGCCTTGCTTTACGCCGGTCATCTACGTTAGAGTTGTTGAAACTCCTTCAAGATACCATGGAGGCTCAGATGGAAAGAATTGACAGTATAGCCCAGGTTTTGCATGGCGAGTTATCTTCAGAAGATGCTATAATTCAGATGTCTCAGATTGATGACATGATGAAAGAAGAGGAAAGTAATTTACGTGAAATCATTAATGCTCTCAATGATTCACATAAAGAGTATACTATTGGAATTCAAAGTTATATCAGTTGGTGCTTACAAGATCAGTCTGAAGTTAAACGCCTTGCAGGTGACCTTGAAGAGAGCATAACTGGACTTGAAGAGAGTAGAAGAAAACTAGTCAATCTGAAAATGCAAAAGGATGCAGTGCACGGAAACTTGTCTCCTGAAAAACCCACAGACAGGACTATGAGTTTGCGTGAACTGAAGGATTCAATTGAGGAAGCAAAGATACTGAATGCTGATCGTCTTACTGAGCTTCAAGAGGCACATGAAGAAAATGAAACCTTGACAAAGCAATTCCAAGATTTTCAGAATGAACTGAATGATGACAAGTATATACGCACTTCCAGAATATATTCATTGACGAATGATCAACTTCAACATTGGATTGCTGAGTTAGCTCGGTATAAGATGTTGGTAGAGTCTTTGCAGGCGGGAAGTGTCCATGTCACAAAATGGGAGAAAGAGCTGAACTCCAAATTGGAGTCTGTTGATACTGCAAGGCATGCCATTGACTGTTCAGATTCCAGGATTGAAGAGCTGGAGGTTCAGTTGCAGAAGTGTACTATTGAAAAGAATGATCTTGAAATTAAGATGGAAGAGGCTATACAAGATACTGGGAGAAAAGATATCAAATCCGAGTTCCGTGTGATGGCTTCAGCTTTGTCCAAAGAAATGGGAATGATGGAAGCTCAGGTGAAGCGATGGAAGGATGCAGCTCATGAGGCGGTATCATTACGCGAGAAAGCTCATTCACTAAGAGCCGTGTTGAGTGGGAAGACAAGCGAAGTTAGCAGCCTTGCAAACAAATGTACTGAACAGGATTTGGAAATCAAGTCTTTAAGAGCATTGATTGAAAAGTTACAGAAGGAGAAACTAGAGTTGGAATTCATTCTGGAAATGCATGGACAAGAGAATTATGATAAAAGTACTCTGGCAGAAATTAGAGAATCTGAAAATAAAGCCCACTCTCAAGCTGAAATGCTGAAAAATGCTTTAGATGAACATAGTCTTGAGTTAAGAGTAAAAGCTGCTAATGAAGCTGAAGAAGCTTGTGAACAAAGGCTTGCTGCTGCAGAAGCTGAAATAGAGGACTTAAGAGCCAAGCTGGATGCAGCTGAGAGAGATATTTTGGAGCTGACTGAGGCTATTAAAGTGAAAGAGGCTGAGGCAGAGGCATATATATCTGAAATCGAGACTATTGGTCAAGCATATGAAGATATGCAGACACAGAACCAACATCTGATGAAGCAGGTGACTGAGAGGGATGACTATAATATCAAGCTTGTATCAGAAAGTGTGAAGACAAAACAAGTACACAGTTCTTTAGTGGCTGAGAAGCAGGCCTTGGCAAAGCAACTTCAACAAATTAACTCTTTAATTGATGCCTCAAAAATGAGGATTGCACACGTTGAGGAACAGATGAAGGCTGTTCTATCAGAAGGCATCAAATGTAATCAGGAGGAAAAAAACCTTCATGTCACCCTGGAATTTGCCAAGTGGGAATTGGCTGATGCTGAGAAGGAGTTAAAGTGGCTGAAGTCTGCCCTTTCCTCTTCGGAGAAAGAATACGACCAAATACAGAAAGATGTGGCAGCAGTTGAAATGGAATTAGAAAGTGAAAGGAGTTCACGGATGAAGCTCGAGGAAGAACTCAGGGAAGTGAACAGGCAAATCGCCGAGCTGAGTTCTGAAACCGGTGAAACCGCAATACAAAAGCTCGAAGCGGAGATAAAGATCTGTAAGAACATGATTAAGTGCACCGTCTGTTCTGATCGGCCAAAGGAGGTGGTGATTGTCAAATGCTATCATCTGTTCTGCAATCCATGCATACAAAGAAATCTAGAGCTCAGGCACCGCAAGTGCCCTGCATGTGGAACAGCATTTGGACAAAGTGATGTTCGCTTTGTTAAAATATGA 2601 0.4145 MENSDHNEPEKKRPHLTSVSSRVARNSPSNNKTADAGVLQAQNQQLVQKIDIQKRALHDLEEKIRELKERQNTHDDLLIAVNQCWIQLSDDLTLLGVRAGRSKDALQTLDYHNNRQGSLPSCPAEDIFLCRLIQKDSVGGNSIGERINYVEESLALRRSSTLELLKLLQDTMEAQMERIDSIAQVLHGELSSEDAIIQMSQIDDMMKEEESNLREIINALNDSHKEYTIGIQSYISWCLQDQSEVKRLAGDLEESITGLEESRRKLVNLKMQKDAVXHGNLSPEKPTDRTMSLRELKDSIEEAKILNADRLTELQEAHEENETLTKQFQDFQNELNDDKYIRTSRIYSLTNDQLQHWIAELARYKMLVESLQAGSVHVTKWEKELNSKLESVDTARHAIDCSDSRIEELEVQLQKCTIEKNDLEIKMEEAIQDTGRKDIKSEFRVMASALSKEMGMMEAQVKRWKDAAHEAVSLREKAHSLRAVLSGKTSEVSSLANKCTEQDLEIKSLRALIEKLQKEKLELEFILEMHGQENYDKSTLAEIRESENKAHSQAEMLKNALDEHSLELRVKAANEAEEACEQRLAAAEAEIEDLRAKLDAAERDILELTEAIKVKEAEAEAYISEIETIGQAYEDMQTQNQHLMKQVTERDDYNIKLVSESVKTKQVHSSLVAEKQALAKQLQQINSLIDASKMRIAHVEEQMKAVLSEGIKCNQEEKNLHVTLEFAKWELADAEKELKWLKSALSSSEKEYDQIQKDVAAVEMELESERSSRMKLEEELREVNRQIAELSSETGETAIQKLEAEIKICKNMIKCTVCSDRPKEVVIVKCYHLFCNPCIQRNLELRHRKCPACGTAFGQSDVRFVKI 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g00965 867 Coils Coil 314 334 - -
Arst7g00965 867 PANTHER RING FINGER PROTEIN-RELATED 9 867 IPR013956 GO:0004842|GO:0010390
Arst7g00965 867 Coils Coil 499 529 - -
Arst7g00965 867 MobiDBLite consensus disorder prediction 1 17 - -
Arst7g00965 867 SUPERFAMILY RING/U-box 814 858 - -
Arst7g00965 867 Coils Coil 206 226 - -
Arst7g00965 867 ProSiteProfiles Zinc finger RING-type profile. 815 853 IPR001841 -
Arst7g00965 867 SMART ring_2 815 853 IPR001841 -
Arst7g00965 867 Coils Coil 43 77 - -
Arst7g00965 867 Coils Coil 570 625 - -
Arst7g00965 867 Coils Coil 724 793 - -
Arst7g00965 867 SUPERFAMILY Tropomyosin 677 815 - -
Arst7g00965 867 MobiDBLite consensus disorder prediction 19 40 - -
Arst7g00965 867 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 796 866 IPR013083 -
Arst7g00965 867 CDD RING-HC_Bre1-like 807 863 - -
Arst7g00965 867 ProSitePatterns Zinc finger RING-type signature. 830 839 IPR017907 -
Arst7g00965 867 Coils Coil 399 433 - -
Arst7g00965 867 Coils Coil 543 563 - -
Arst7g00965 867 MobiDBLite consensus disorder prediction 1 40 - -
Arst7g00965 867 Pfam Zinc finger, C3HC4 type (RING finger) 814 856 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g00965 Arst-Chr7 7396880 7409670 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g00965 799 862 RAD5 or RAD16-like Gene Family AT5G05130 32.812 5.97e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g00965 K10696 - gmx:100796610 1257.28