Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Arst7g00959 | ATGCCAGAAAACAGGCAGGTTCTGAGGAATGCTGCTTCTAATCAATCCGGTGACAACATTGAAGAAGCAATTCGGCGATTGAAAATCAATGACAATCGAGATAGAGATACTGCGGGTCAAACTAGCCCGTATCCGGATCGTCCTGGTGAACCTGATTGCTTATATTTTCTGAGGACTGGAATGTGTGGTTATGGGACTAACTGTCGCTACAATCACCCCGCTAATGTTTCACTGGGTACTCATTATGGTGAAGAGCTCCCTGAGAGAAACGGGCAACCTGATTGTGAGTATTTTCTTAAGACAGGGACATGTAAGTATGGATCATCGTGTAAATATCATCATCCACGGGACAGACGAGGTGCTGCTCCTGTATCATTCAATGCTTTAGGCCTTCCAATGCGTCAGGAAGAAAAATCATGTCCCTATTACATGAGAACTGGGTCTTGTAAGTTTGGAGTAGCTTGCAAGTTTCATCATCCGCCGCATGCTACTTTTGGAGCTTCTGGAGTGGCTGCATCTCCTACCTCAATGATCCCCGCATCTGGATATGTTGGTGGATATCCGTATTCCTTACCGAGAATGCCATATTTATCTGGACAGGGCCTTCAGTCTTATGTGCCTCCTTTCTTTTCTTCTCCACAAGGAATTATACCCGGACAGGGTTGGAACAGCTACATGGGAAGTATGAACCCTGCAATGTCTACTGGTTTTCTTGGATCTAATCTTGTTTACGACTCTGTGAATCCGGGTGAGTCACTTTCTGGTGGGCAGGTAGTAAGTCTTAATCTCCCAGATAGGCCTGATCAGCCAGAATGCAGATACTATATGAACACAGGGACTTGCAAGTATGGATCTGATTGTAAGTTCCACCACCCGAAAGAAAGAATCGCCCAGTCATTCATAAATCCACTCGGCCTTCCTGTGCGACCTAACTATCGCTTGGCCACACCTACTGCTTTATCTGCACTGGACACCCCTCTCGACGGCAATCGAAGAGGGACTTTCCAACCACCCGAGACATCACCATCTAAATTATCGAGTGATGAGCATCAGCATTCGGATAATAATATCAATAATTCACAGGCCGCTGAAGATTCATCCAAACAAGCTGATCATACTACCTCAAATTCCTTTGAAGTGGCCTCGGAATCCTCCTTACATGACCAAGATGCTTGA | 1176 | 0.4566 | MPENRQVLRNAASNQSGDNIEEAIRRLKINDNRDRDTAGQTSPYPDRPGEPDCLYFLRTGMCGYGTNCRYNHPANVSLGTHYGEELPERNGQPDCEYFLKTGTCKYGSSCKYHHPRDRRGAAPVSFNALGLPMRQEEKSCPYYMRTGSCKFGVACKFHHPPHATFGASGVAASPTSMIPASGYVGGYPYSLPRMPYLSGQGLQSYVPPFFSSPQGIIPGQGWNSYMGSMNPAMSTGFLGSNLVYDSVNPGESLSGGQVVSLNLPDRPDQPECRYYMNTGTCKYGSDCKFHHPKERIAQSFINPLGLPVRPNYRLATPTALSALDTPLDGNRRGTFQPPETSPSKLSSDEHQHSDNNINNSQAAEDSSKQADHTTSNSFEVASESSLHDQDA | 391 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Arst7g00959 | 391 | SUPERFAMILY | CCCH zinc finger | 52 | 74 | IPR036855 | GO:0046872 | |
Arst7g00959 | 391 | SUPERFAMILY | CCCH zinc finger | 270 | 295 | IPR036855 | GO:0046872 | |
Arst7g00959 | 391 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Arst7g00959 | 391 | SUPERFAMILY | CCCH zinc finger | 94 | 118 | IPR036855 | GO:0046872 | |
Arst7g00959 | 391 | Gene3D | - | 259 | 302 | - | - | |
Arst7g00959 | 391 | Gene3D | - | 45 | 120 | - | - | |
Arst7g00959 | 391 | ProSiteProfiles | Zinc finger C3H1-type profile. | 89 | 117 | IPR000571 | GO:0046872 | |
Arst7g00959 | 391 | MobiDBLite | consensus disorder prediction | 27 | 47 | - | - | |
Arst7g00959 | 391 | ProSiteProfiles | Zinc finger C3H1-type profile. | 134 | 162 | IPR000571 | GO:0046872 | |
Arst7g00959 | 391 | Gene3D | - | 121 | 168 | - | - | |
Arst7g00959 | 391 | PANTHER | PROTEIN PHOSPHATASE RELATED | 22 | 311 | - | - | |
Arst7g00959 | 391 | MobiDBLite | consensus disorder prediction | 322 | 391 | - | - | |
Arst7g00959 | 391 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 138 | 161 | IPR000571 | GO:0046872 | |
Arst7g00959 | 391 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 49 | 73 | IPR000571 | GO:0046872 | |
Arst7g00959 | 391 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 268 | 293 | IPR000571 | GO:0046872 | |
Arst7g00959 | 391 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 91 | 116 | IPR000571 | GO:0046872 | |
Arst7g00959 | 391 | ProSiteProfiles | Zinc finger C3H1-type profile. | 266 | 294 | IPR000571 | GO:0046872 | |
Arst7g00959 | 391 | ProSiteProfiles | Zinc finger C3H1-type profile. | 47 | 75 | IPR000571 | GO:0046872 | |
Arst7g00959 | 391 | SMART | c3hfinal6 | 47 | 74 | IPR000571 | GO:0046872 | |
Arst7g00959 | 391 | SMART | c3hfinal6 | 89 | 116 | IPR000571 | GO:0046872 | |
Arst7g00959 | 391 | SMART | c3hfinal6 | 136 | 161 | IPR000571 | GO:0046872 | |
Arst7g00959 | 391 | SMART | c3hfinal6 | 266 | 293 | IPR000571 | GO:0046872 | |
Arst7g00959 | 391 | MobiDBLite | consensus disorder prediction | 352 | 384 | - | - | |
Arst7g00959 | 391 | SUPERFAMILY | CCCH zinc finger | 133 | 162 | IPR036855 | GO:0046872 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Arst7g00959 | Arst-Chr7 | 7322527 | 7326625 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Arst7g00959 | 1 | 310 | C3H Transcription Factor Family | AT1G04990 | 51.553 | 1.33e-99 | 300 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C3H | Arst7g00959 | zf-CCCH | 1e-10 | CL0537 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Arst7g00959 | - | - | gmx:100812856 | 565.459 |