Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g00954 ATGCAAGTAGCAGAACTCCAACAAAACCTGGTTCAACACCAACACAAAGAGAACAAGATCATGTGCAAGAAGATCCAGCTAAGTGTCTCTGACACTGAACTCCATAATCACCATCATAATTCATGTGGTTGTGATGTTGATGGGTGCCACAAGGTTGAGGGTGAGGATCTATTCATTCCACCCCTCAATTTTGCAATGGTTGATAATGGCATTTTCAGGTCTGGTTTCCCTGAACCTGCTAACTTCTCCTTCCTTCAGACCCTTGCTCTCCGCTCTATCATATATCTATGTCCTGAGCCATATCCAGAGGCTAACATGGAGTTCCTCAAGTCAAATGGGATCAAGCTTTATCAATTTGGAATTGAGGGTCATAAGGAGCCTTTTGTAAACATCCCAGAAGACACAATCCGTGAAGCATTAAAAGTTGTCCTTGATGTCAGGAACCATCCACTTATAATTCATTGTAAGCGGGGGAAGCACCGAACGGGGTGTTTAGTAGGATGCTATAGGAAGTTGCAGAAATGGTGTTTGTCTTCTGTGTTTGATGAATACCAACGCTTTGCAGCTGCAAAAGCAAGAGTTTCAGATCAGAGGTTGGATTGA 603 0.4312 MQVAELQQNLVQHQHKENKIMCKKIQLSVSDTELHNHHHNSCGCDVDGCHKVEGEDLFIPPLNFAMVDNGIFRSGFPEPANFSFLQTLALRSIIYLCPEPYPEANMEFLKSNGIKLYQFGIEGHKEPFVNIPEDTIREALKVVLDVRNHPLIIHCKRGKHRTGCLVGCYRKLQKWCLSSVFDEYQRFAAAKARVSDQRLD 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g00954 200 PRINTS Plant and fungal dual specificity phosphatase signature 95 108 IPR020428 GO:0016791
Arst7g00954 200 PRINTS Plant and fungal dual specificity phosphatase signature 131 145 IPR020428 GO:0016791
Arst7g00954 200 PRINTS Plant and fungal dual specificity phosphatase signature 58 75 IPR020428 GO:0016791
Arst7g00954 200 PRINTS Plant and fungal dual specificity phosphatase signature 114 128 IPR020428 GO:0016791
Arst7g00954 200 ProSiteProfiles Dual specificity protein phosphatase domain profile. 63 200 IPR020422 GO:0006470|GO:0008138
Arst7g00954 200 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 59 199 IPR029021 -
Arst7g00954 200 ProSitePatterns Tyrosine specific protein phosphatases active site. 153 163 IPR016130 GO:0016311|GO:0016791
Arst7g00954 200 PANTHER TYROSINE-PROTEIN PHOSPHATASE 38 199 - -
Arst7g00954 200 Pfam Tyrosine phosphatase family 59 198 IPR004861 -
Arst7g00954 200 CDD PFA-DSP_Siw14 57 198 - -
Arst7g00954 200 Gene3D Protein tyrosine phosphatase superfamily 57 199 IPR029021 -
Arst7g00954 200 FunFam probable tyrosine-protein phosphatase At1g05000 57 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g00954 Arst-Chr7 7204052 7210638 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g00954 54 199 Protein tyrosine phosphatase (PTP) family AT4G03960 77.397 4.10e-87 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g00954 K18045 - gmx:100814279 320.857