LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst7g00851	ATGGCCGGAACCTCGACGACGCCGGAGAAGTCGGCGACGGCGATGGCGCTGATGTCTCCGACGACCTCGCGGTCGGTGACGCAGACGGTGAACGGCTCACATAAGTTTGTGATCCAGGGTTACTCTTTGGCGAAGGGTATGGGAATCGGAAAACACATCGCGAGCGACGTTTTCTGTGTCGGAGGTTACCAGTGGGCGATCTACTTCTACCCCGACGGGAAGAATCCGGAGGATAACTCAGCTTACGTTTCGGCGTTCATCGCTCTCGCTAGCGAAGGAACCGATGTGAGGGCGCTTTTCGAGCTCACGCTTGTTGATCAGAGTGGACAGGGAAAGCATAAGGTCCATAGCCACTTCGATCGGTCGCTTGAGAGTGGACCTTACACCCTCAAGTACAAGGGAAGCATGTGGGGGTACAAGCGGTTTTTCAGACGGTCTGTGCTTGAAACCTCTGATTTTCTTAAGAACGATTGCTTGAAAATCAACTGTACAGTTGGAGTTGTGGTTTCAGCTACAGATTGTCCGCAACTTCACTCTATCAGTGTACCAGAGTCAGACATCGGATCTCATTTTGGTATGCTATTGGAAAATATGGAAGGGTCAGATGTTACTTTTAATGTAGCTGGGGAGAAGTTTCCTGCTCATAAGTTAGTGTTGGCTGCTAGATCCCCTCAATTTCGTTCGAAGTTTTTCGAAGGCTTAGATGCGGAAAAGCGAGAGATCACAATATCAGATTTAGAACCTAAGGTTTTTAAGGCCATGCTGCACTTTATCTATAGGGATACCCTTACAGAAGAGGTGGACATGGTTCCATCTACCACATATAGTGATTTTCCAGCTTCGGATACATTGAAAGGGAAGTTGTTAGCTGCAGCAGACAAGTATGGCTTGGAGAGGCTTAAACTGATGTGTGAATCTTGTCTTTGCAAGGACATTTGTGTGAGTTCCGTGGCCAATATTTTGACTTTGGCTGACAATTGCCATGCTACAGAGTTAAAATCTGTTTGCCTAAAATTTGCTGCTCAAAATCTAGCAGCTGTTATGAGGTCAGATGGATTTGAGCATATGAAAGAAAAATGCCCATGGCTACAGTCAGAGATCTTGAAGACAATTGCGGGCTGTGAGAGTGACAATTGCAGCGGAGGGGAAAAATCTCAGAGCGTGTGGGCGCAGCTATCAGAAGGTGGTGACACAAATGGTGATCATGCTGATAAAAATGATAAAGGCAAAGGAGAGGGAAAACCCTTTTCTGTCCAACTTCCCAATGTTTCAATGGGTAGTAGTTTAGGAAAAAGAGGTAGACCACTACTAGTGGTATGCGTATGCAGGTTTTTGTTGTCAATGTCACAAGTGATGTGTATGTTGCTAGTGCAGAGAAGTCACTAA	1386	0.4639	MAGTSTTPEKSATAMALMSPTTSRSVTQTVNGSHKFVIQGYSLAKGMGIGKHIASDVFCVGGYQWAIYFYPDGKNPEDNSAYVSAFIALASEGTDVRALFELTLVDQSGQGKHKVHSHFDRSLESGPYTLKYKGSMWGYKRFFRRSVLETSDFLKNDCLKINCTVGVVVSATDCPQLHSISVPESDIGSHFGMLLENMEGSDVTFNVAGEKFPAHKLVLAARSPQFRSKFFEGLDAEKREITISDLEPKVFKAMLHFIYRDTLTEEVDMVPSTTYSDFPASDTLKGKLLAAADKYGLERLKLMCESCLCKDICVSSVANILTLADNCHATELKSVCLKFAAQNLAAVMRSDGFEHMKEKCPWLQSEILKTIAGCESDNCSGGEKSQSVWAQLSEGGDTNGDHADKNDKGKGEGKPFSVQLPNVSMGSSLGKRGRPLLVVCVCRFLLSMSQVMCMLLVQRSH	461

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst7g00851	461	Gene3D	Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A	30	169	IPR008974	GO:0005515
	Arst7g00851	461	Gene3D	Potassium Channel Kv1.1; Chain A	177	306	IPR011333	-
	Arst7g00851	461	SUPERFAMILY	TRAF domain-like	29	172	-	-
	Arst7g00851	461	Pfam	BTB/POZ domain	194	310	IPR000210	GO:0005515
	Arst7g00851	461	MobiDBLite	consensus disorder prediction	392	419	-	-
	Arst7g00851	461	CDD	BTB_POZ_BPM_plant	187	309	-	-
	Arst7g00851	461	PANTHER	BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1	21	368	IPR045005	GO:0016567
	Arst7g00851	461	SMART	math_3	36	148	IPR002083	GO:0005515
	Arst7g00851	461	FunFam	BTB-POZ and math domain 1	177	306	-	-
	Arst7g00851	461	CDD	BACK_AtBPM-like	309	370	IPR034090	-
	Arst7g00851	461	ProSiteProfiles	MATH/TRAF domain profile.	31	165	IPR002083	GO:0005515
	Arst7g00851	461	SUPERFAMILY	POZ domain	179	312	IPR011333	-
	Arst7g00851	461	ProSiteProfiles	BTB domain profile.	201	267	IPR000210	GO:0005515
	Arst7g00851	461	SMART	BTB_4	201	312	IPR000210	GO:0005515
	Arst7g00851	461	MobiDBLite	consensus disorder prediction	398	412	-	-
	Arst7g00851	461	FunFam	BTB/POZ and MATH domain-containing protein 4	30	169	-	-
	Arst7g00851	461	Gene3D	-	311	386	-	-
	Arst7g00851	461	CDD	MATH	32	165	IPR002083	GO:0005515

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst7g00851	Arst-Chr7	5992127	5996881	Dispersed/Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TR	TRAF	Arst7g00851		BTB	2.1e-24	CL0033

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst7g00851	K10523		-	gmx:100806769	684.1