Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g00815 ATGCACCACTCTTTGTCAGAATTGAAGAGACTCAGTTATTGGATCACCATGGAAAACAAAGTAGCAAGAACAAGTGAAGCTCAACCCATAAGATGTAAAGCTGCGGTTAGTCGCAAACAAGGTGAGGCATTGAGCATTGAAAAGATCATTGTGGCACCACCAATGGCTCGTGAAGCAAGGATTAAAGTTATATGCACCACTCTTTGTCACGTTGATCTCACTTTTTGGAACACTAAGGACCCTGCTTCAATTTGGCCAAGAATTCTGGGTCATGAGGCAATTGGGGTTGTGGAAAGCATAGGAGAGAATGTAACTGAAATTGCAAAAGGAGATGTAGTTATGACAATTTTCTTACCAGATTGTGGAGAGTGTGTGGATTGCAAATCAGAAAAGAGCAACTTGTGTTCAAAATTCCCATTCAAAGTATCTCCATGGATGCCACGATATGATAGTAGCAGATTCACTGATCTCAATGGAAACATCATACACCATTTCCTTTCTGTTTCAAGTTTTACTGAGTACACTGTCATTGACATTGCCAATCTAACCAAGATTGATCCACTTGTTCCTCCAAACAAGGCATGCCTCCTTAGTTGTGGTATCTCAGCTGGGCTAGGTGCTGCTTGGAGATTAGCAAATGTAGAGCCAGGTTCAACTGTTGCTATTTTTGGGTTGGGAAGCATTGGATTAGCAGTTGCTGAAGGAGCTAGATTTTGTGGAGCAACTAGGATTATTGGTGTGGATGTTAAGCCAGAAAAATTTGAAATTGCAAAAAAGTTTGGAGTTACTGATTTTGTTAATGCTGGAGAATGTGGAGACAAATCTCTAAGCCAGATAATTATAGATATGACTGGTGGTGGAGCAGATTACTGCTTTGAATGTGTTGGTTTAATATCATCAGTTCATGAAGCATATGCTTCTTGTAGAAAGGGTTGGGGAAAAACAATTGTTTTAGGAGTGGACAAGCCAGAATCCAAGTTGAGTCTTAACACTAGAGAGATCCTCTTCAATGGGAAGAGCCTAATTGGATGCTTATTTGGAGGACTCAAACCCAAATCTCATGTCCCTGTTCTCCTTAAACGTTACATGGACAAGGAACTAAAGTTGGATGAATTTGTCACTCATGAGTTGAAATTCAAAGACATCAACAAAGCTTTTGATTTACTGATGAAAGGAGAGTGTCTGAGATGTGTAGTTTGGATGGACAAATGA 1212 0.4002 MHHSLSELKRLSYWITMENKVARTSEAQPIRCKAAVSRKQGEALSIEKIIVAPPMAREARIKVICTTLCHVDLTFWNTKDPASIWPRILGHEAIGVVESIGENVTEIAKGDVVMTIFLPDCGECVDCKSEKSNLCSKFPFKVSPWMPRYDSSRFTDLNGNIIHHFLSVSSFTEYTVIDIANLTKIDPLVPPNKACLLSCGISAGLGAAWRLANVEPGSTVAIFGLGSIGLAVAEGARFCGATRIIGVDVKPEKFEIAKKFGVTDFVNAGECGDKSLSQIIIDMTGGGADYCFECVGLISSVHEAYASCRKGWGKTIVLGVDKPESKLSLNTREILFNGKSLIGCLFGGLKPKSHVPVLLKRYMDKELKLDEFVTHELKFKDINKAFDLLMKGECLRCVVWMDK 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g00815 403 Pfam Zinc-binding dehydrogenase 228 348 IPR013149 -
Arst7g00815 403 Gene3D - 204 344 - -
Arst7g00815 403 Gene3D - 35 396 - -
Arst7g00815 403 SUPERFAMILY GroES-like 26 210 IPR011032 -
Arst7g00815 403 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 189 364 IPR036291 -
Arst7g00815 403 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 90 104 IPR002328 GO:0008270|GO:0016491
Arst7g00815 403 FunFam Alcohol dehydrogenase 6 35 215 - -
Arst7g00815 403 Pfam Alcohol dehydrogenase GroES-like domain 57 182 IPR013154 -
Arst7g00815 403 FunFam S-(hydroxymethyl)glutathione dehydrogenase 204 344 - -
Arst7g00815 403 PANTHER ALCOHOL DEHYDROGENASE 28 399 - -
Arst7g00815 403 SUPERFAMILY GroES-like 352 400 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g00815 Arst-Chr7 5889450 5901608 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g00815 57 350 Monolignol Biosynthesis Gene Families AT4G37990 23.986 5.84e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g00815 K00121 - gmx:100788587 643.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst7g00815 7 5889450 5901608 Arst7g00815 7 5889450 5901608 ECH