Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g00793 ATGTTGGAGCTGGTGGTCATGGATCATTTGGGAGATCGCATCCAATGCTCAATTAGAAACCATCAAAGAAGGCAGTTTGAGCATGAAGTGTCTGAGGGGAGTATATACACAATCTCCAACTTCACAGTCTCCTCGAATGATTTAAAGTACAAGGCCACTAACCATGCTAGCAGAATATATTTCAAAAGGGATACTCAAGTGAGGATGGTTCAGGATCCAACCTTTCCTCAACATGTTTTTCGCTTCATGCCCAACGAATTAATCCTTAACCACACTAATGCACAATCTCATCTAATTGATGTCATTGGCCTTCTCACTGCTAAGGGCGACATCATTGAATTCACTAAGAATGGGAAGAAGTGCATTTACATTGTGATAGAGCTTGATGATATGCAGGGAAAGGGTAAGATCCGTTGCACACTGTGGGAAGAGTTTGCAACCCAACTGGTGAAGCATATGGAGGAACAACCAACAACAGAGTACATCCTAATTTTACAATTTGCAAAATTCAATCTCTTCAAAGGTACAATGGGTATATCAAATACCAATCACAATTCTATTATGCACATCAATGCTGATTTTCAGGAGGTGAAGGACTTTCGAAAGAGTCTTATAATGTCAGGAGTCCCATCTGCGAATCAACTCACCCAAATAGTTGCTGAACCAGCATATTCCCTTGAAGAAGACCTCATCAACAATTCCATTTATAAGCCCATATCTGAGCTAAAAGAGACATTTGAGGCTGGAACCTTTGTCACGATTGGCACCGTCATTGCCATTGATCCGAAGAACGGTTGGTGGTACAAAAGTTGCAAACAATGCTTCACTTCCCTAAGGGAAGCAGAAAATTCATACCATTGTGCAAAGTGCAACTCACACCCCTTGACACACACCCCAAGGTATAGCATTAATATGAAGGTTGCTGATGACACTGACACAGCTATTTTCTTGCTGTACGACAAAGAAGCCTCCAGATACTTGGGTATCTCTGCCTCTGATCTAAGGCTCGCACAACTAACTAGGGGAGGAGTCCATGAGGAATATCCAACTGAGCTGAATGCATTGGTGGGGAAGAAATTCCTGTTCAAGTTAATTGTTAAGATGGAAGATGTCAATGCATTCCAACCCTGCAAGATTGTTGTTGCTAAACTTTGTGAGGAGGACACAATTATGAACAAGTTTCTTGAAAAGAACAACATATGTGAGCAAAGTGTGGGTGTTGAGAATTCTGAATTGCTTAGCATGAACACCGACTCTGCTGAGACCCCCAAGGACACAAGTGCCCCATCTACTGAGAATTCAATGGAGGTTCCGTTGGATGCATTCTCAACCCCCAAGAGCAAGATAATTACTGGTGGATGGTCCAAGAAACTAATTGATGTCTACCCAGAAGATCTTGATGCATCGTCTTCAAAGCGTAGGAAGGCCACCAACGGCGACAAGGCAACTCTTGCCAAAGAACATCATGATTAG 1473 0.4243 MLELVVMDHLGDRIQCSIRNHQRRQFEHEVSEGSIYTISNFTVSSNDLKYKATNHASRIYFKRDTQVRMVQDPTFPQHVFRFMPNELILNHTNAQSHLIDVIGLLTAKGDIIEFTKNGKKCIYIVIELDDMQGKGKIRCTLWEEFATQLVKHMEEQPTTEYILILQFAKFNLFKGTMGISNTNHNSIMHINADFQEVKDFRKSLIMSGVPSANQLTQIVAEPAYSLEEDLINNSIYKPISELKETFEAGTFVTIGTVIAIDPKNGWWYKSCKQCFTSLREAENSYHCAKCNSHPLTHTPRYSINMKVADDTDTAIFLLYDKEASRYLGISASDLRLAQLTRGGVHEEYPTELNALVGKKFLFKLIVKMEDVNAFQPCKIVVAKLCEEDTIMNKFLEKNNICEQSVGVENSELLSMNTDSAETPKDTSAPSTENSMEVPLDAFSTPKSKIITGGWSKKLIDVYPEDLDASSSKRRKATNGDKATLAKEHHD 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g00793 490 SUPERFAMILY Nucleic acid-binding proteins 3 73 IPR012340 -
Arst7g00793 490 CDD RPA1_DBD_C 239 372 IPR047192 -
Arst7g00793 490 Pfam Replication factor-A C terminal domain 252 386 IPR013955 -
Arst7g00793 490 SUPERFAMILY Nucleic acid-binding proteins 95 204 IPR012340 -
Arst7g00793 490 PANTHER OS03G0429900 PROTEIN 170 447 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Arst7g00793 490 CDD RPA1_DBD_A_like 2 67 - -
Arst7g00793 490 Gene3D - 74 209 IPR012340 -
Arst7g00793 490 CDD RPA1_DBD_B_like 100 205 - -
Arst7g00793 490 MobiDBLite consensus disorder prediction 466 490 - -
Arst7g00793 490 Pfam Domain of unknown function DUF223 3 93 IPR003871 -
Arst7g00793 490 SUPERFAMILY Nucleic acid-binding proteins 237 390 IPR012340 -
Arst7g00793 490 Gene3D - 229 395 IPR012340 -
Arst7g00793 490 MobiDBLite consensus disorder prediction 417 440 - -
Arst7g00793 490 Gene3D - 1 72 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g00793 Arst-Chr7 5687991 5695707 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g00793 6 381 Core DNA Replication Machinery Family AT5G08020 24.041 1.15e-19 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g00793 - - ahf:112707100 729.554