Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g00720 ATGGCATTCACACTAGAAGAGAGGAGGAGTAGTAACATTGAAGAGGAGGAAAACATGAATAAGATGAAGAAGATGATGATGATGATGGATTCATCATCACAAAAGAAGTTACCATCATCATCATCATCAGTGCCAGCACCATTCCTGACAAAGACATACCAACTAGTTGATGATCCTATGACTGACCACATAGTGTCATGGGGTCATGATGGTCATTCCACATCATCATCATTTGTTGTTTGGAGACCTCCTGAGTTTGCCAGAGACCTTCTTCCCAACTATTTCAAACACAACAACTTCTCCAGCTTTGTTAGGCAACTCAATACCTATGGATTCAAGAAGGTAGTTGCTGATAGATGGGAATTTGCAAATGAGTATTTCAGAAAAGGAGCAAAACATCTTCTATGTGAAATCCATAGAAGAAAAACCCCTCATCATCATCACCATCATCATCATCATCATCAAGAGAATAATAATGAAGCTCTATGTTGGATTGATTCTTCTACAACTCCTACTACTATTCCTTCTATTCCTACTTCATTATTACTACCTTCTCCTAAATCACCATCATCTTCTTCATTAGGAGGAGCCACTAATAATAGTGATCATCATCAACATAATCATATCTTAGCAGCACTTTCTGAGGATAATCAAAGGCTAAGGAGAAAGAACTTGATGCTATTATCTGAACTAACTCACATGAAGAATCTCTACAATGATATCATATACTTCATCCAAAACCATCTCAAACCTGCTTCTTCTCCCTTTCATCATAATCAAACAACTATTCCAAAGCTTGTGGAGTTGGATTATTCATCACCAAAGGGGAGTAGAATGATGATGAGTATTAGTGACGATCATGTTGATGATGATGATGATGATGATGATGATTTCAATAATAATAATTGTAGTTCTTCTTCAGTGAAGCTCTTTGGTGTTCCTCTTAGTGGTAAAAAGAGATTACACCCAGATAATATTTTTCAACAAGATTAA 993 0.3646 MAFTLEERRSSNIEEEENMNKMKKMMMMMDSSSQKKLPSSSSSVPAPFLTKTYQLVDDPMTDHIVSWGHDGHSTSSSFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFKKVVADRWEFANEYFRKGAKHLLCEIHRRKTPHHHHHHHHHHQENNNEALCWIDSSTTPTTIPSIPTSLLLPSPKSPSSSSLGGATNNSDHHQHNHILAALSEDNQRLRRKNLMLLSELTHMKNLYNDIIYFIQNHLKPASSPFHHNQTTIPKLVELDYSSPKGSRMMMSISDDHVDDDDDDDDDFNNNNCSSSSVKLFGVPLSGKKRLHPDNIFQQD 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g00720 330 ProSitePatterns HSF-type DNA-binding domain signature. 91 115 IPR000232 GO:0003700|GO:0006355|GO:0043565
Arst7g00720 330 SUPERFAMILY "Winged helix" DNA-binding domain 45 141 IPR036390 -
Arst7g00720 330 Gene3D - 40 143 IPR036388 -
Arst7g00720 330 SMART hsfneu3 44 141 IPR000232 GO:0003700|GO:0006355|GO:0043565
Arst7g00720 330 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 39 278 IPR027725 -
Arst7g00720 330 MobiDBLite consensus disorder prediction 277 310 - -
Arst7g00720 330 Coils Coil 210 230 - -
Arst7g00720 330 FunFam Heat stress transcription factor B-4 40 142 - -
Arst7g00720 330 Pfam HSF-type DNA-binding 48 141 IPR000232 GO:0003700|GO:0006355|GO:0043565
Arst7g00720 330 MobiDBLite consensus disorder prediction 176 203 - -
Arst7g00720 330 PRINTS Heat shock factor (HSF) domain signature 103 115 IPR000232 GO:0003700|GO:0006355|GO:0043565
Arst7g00720 330 PRINTS Heat shock factor (HSF) domain signature 48 71 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g00720 Arst-Chr7 4920228 4921736 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g00720 34 322 HSF AT1G46264 46.177 1.31e-80 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Arst7g00720 HSF_DNA-bind 1.1e-30 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g00720 K09419 - gmx:100527682 305.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst7g00720 7 4920228 4921736 Arst7g00720 7 4920228 4921736 ECH