Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g00713 ATGGGGAACTGTTGCTCTAGAGGCACTGAGGCCCCAGAGGAGAATTCTAATGCTAATGCCAATGCCAATGGTGGAGGAGAGGCACAATCAAGGCCGGCCGCGCCTGCTAAGCCGACCAAACAAGGGCCGGTCGGTCCTGTCCTAGGAAGGCCAATGGAAGATGTTAAATCAACATATAGCATGGGCAAGGAGCTAGGTAGAGGACAATTTGGTGTGACACATTTGTGCACTCATAAGGTCACAGGGAAGCAATATGCTTGCAAGACCATAGCCAAGAGGAAGCTATCTAACAAGGAGGATATCGAGGATGTTCGCCGAGAGGTTCAGATCATGCACCATCTCACAGGGCAGCCTAACATTGTGGAGCTCATTGGTGCCTATGAGGACAAACAGTCTGTTCACCTTGTCATGGAGTTGTGCGCCGGAGGCGAGCTCTTTGATCGGATCATTGCTAAGGGGCATTATACTGAGCGTGCCGCGGCTTCCTTGTTGAGAACCATTGTCCAAATTGTCCATACTTGCCATTCAATGGGAGTTATTCATAGAGATCTTAAGCCTGAGAATTTCCTTTTGTTGAATAAGGATGAGAATGCCCCCCTTAAGGCCACAGATTTTGGTCTCTCAGTTTTCTACAAGCAAGGAGAGGTATTTAAAGACATTGTTGGTAGTGCATATTACATTGCACCAGAGGTTTTGAAGAGGAAATATGGGCCAGAAGTTGATATATGGAGTGTTGGTGTAATGTTATACATTCTTCTATGTGGTGTTCCTCCATTTTGGGCAGAATCTGAAAATGGGATATTCAATGCCATTCTAAGAGGCCACCTTGACTTTTCAAGTGATCCATGGCCCTCAATTTCACCAGCAGCAAAAGATCTTGTAAGAAAAATGTTGAATTCTGATCCCAAACAAAGGATAACAGCCTACCAAGTTCTCAACCATCCATGGATCAAGGAGGATGGAGAAGCACCGGATAAACCACTCGACAACGCTGTCCTGAATAGGCTCAAACAATTCAGAGCAATGAACCAATTCAAGAAAGTTGCTCTAAGGGTTATTGCTGGTTGCTTATCAGAGGAAGAAATCATGGGACTGAAGCAGATGTTCAAGGGGATGGACACCGACAACAGCGGAACCATTACAATTGAAGAACTCAAGCAAGGAATGGCAAAACAAGGGACTAAGTTGTCAGAACAAGAACTTCAGCAATTAATGGAAGCTGCAGATGCAGATGGTAATGGACTAATAGATTACGACGAGTTCATCGCGGCAACAATGCACATGAACAGAATGAACAGAGAAGAACACCTTTATACAGCATTCCAATACTTTGACAAAGATAACAGCGGGTACATCACTGTTGAAGAACTAGAACAAGCTCTTAAAGAGTTTAACATGCATGACGGAAGAGACATCTCGGAAATCATCCAAGAAGTTGATTCTGATAATGACGGCCGCATTAACTATGATGAGTTTGCAGCAATGATGAGTAAGGGACACCCAGAAGCCATAATGACCCGGAAAAGGTGTTCGGTATCTTCGCTGTACTAG 1551 0.4468 MGNCCSRGTEAPEENSNANANANGGGEAQSRPAAPAKPTKQGPVGPVLGRPMEDVKSTYSMGKELGRGQFGVTHLCTHKVTGKQYACKTIAKRKLSNKEDIEDVRREVQIMHHLTGQPNIVELIGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIVHTCHSMGVIHRDLKPENFLLLNKDENAPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLKRKYGPEVDIWSVGVMLYILLCGVPPFWAESENGIFNAILRGHLDFSSDPWPSISPAAKDLVRKMLNSDPKQRITAYQVLNHPWIKEDGEAPDKPLDNAVLNRLKQFRAMNQFKKVALRVIAGCLSEEEIMGLKQMFKGMDTDNSGTITIEELKQGMAKQGTKLSEQELQQLMEAADADGNGLIDYDEFIAATMHMNRMNREEHLYTAFQYFDKDNSGYITVEELEQALKEFNMHDGRDISEIIQEVDSDNDGRINYDEFAAMMSKGHPEAIMTRKRCSVSSLY 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g00713 516 SMART serkin_6 59 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst7g00713 516 SUPERFAMILY Protein kinase-like (PK-like) 46 345 IPR011009 -
Arst7g00713 516 ProSitePatterns EF-hand calcium-binding domain. 373 385 IPR018247 -
Arst7g00713 516 Gene3D Phosphorylase Kinase; domain 1 61 144 - -
Arst7g00713 516 SMART efh_1 364 392 IPR002048 GO:0005509
Arst7g00713 516 SMART efh_1 471 499 IPR002048 GO:0005509
Arst7g00713 516 SMART efh_1 400 428 IPR002048 GO:0005509
Arst7g00713 516 SMART efh_1 436 464 IPR002048 GO:0005509
Arst7g00713 516 Gene3D - 358 426 - -
Arst7g00713 516 Gene3D Transferase(Phosphotransferase) domain 1 145 335 - -
Arst7g00713 516 CDD EFh 365 424 IPR002048 GO:0005509
Arst7g00713 516 FunFam Calcium-dependent protein kinase 1 325 500 - -
Arst7g00713 516 ProSiteProfiles EF-hand calcium-binding domain profile. 471 502 IPR002048 GO:0005509
Arst7g00713 516 MobiDBLite consensus disorder prediction 1 26 - -
Arst7g00713 516 ProSitePatterns EF-hand calcium-binding domain. 480 492 IPR018247 -
Arst7g00713 516 ProSiteProfiles EF-hand calcium-binding domain profile. 360 395 IPR002048 GO:0005509
Arst7g00713 516 ProSitePatterns Protein kinases ATP-binding region signature. 65 92 IPR017441 GO:0005524
Arst7g00713 516 FunFam Calcium-dependent protein kinase 1 61 144 - -
Arst7g00713 516 FunFam calcium-dependent protein kinase 1 145 324 - -
Arst7g00713 516 SUPERFAMILY EF-hand 357 497 IPR011992 -
Arst7g00713 516 ProSitePatterns EF-hand calcium-binding domain. 445 457 IPR018247 -
Arst7g00713 516 PANTHER SERINE/THREONINE-PROTEIN KINASE 54 492 - -
Arst7g00713 516 ProSiteProfiles EF-hand calcium-binding domain profile. 396 431 IPR002048 GO:0005509
Arst7g00713 516 ProSiteProfiles Protein kinase domain profile. 59 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst7g00713 516 MobiDBLite consensus disorder prediction 1 52 - -
Arst7g00713 516 ProSitePatterns EF-hand calcium-binding domain. 409 421 IPR018247 -
Arst7g00713 516 Pfam Protein kinase domain 59 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst7g00713 516 ProSiteProfiles EF-hand calcium-binding domain profile. 432 467 IPR002048 GO:0005509
Arst7g00713 516 CDD STKc_CAMK 59 316 - -
Arst7g00713 516 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
Arst7g00713 516 Gene3D - 336 496 - -
Arst7g00713 516 Pfam EF-hand domain pair 434 497 IPR002048 GO:0005509
Arst7g00713 516 Pfam EF-hand domain pair 365 425 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g00713 Arst-Chr7 4869238 4871564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g00713 1 509 EF-hand Containing Proteins AT5G12180 82.600 0.0 904
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Arst7g00713 Pkinase 1.4e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g00713 K13412 - gmx:100819061 891.338
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g00051 4 350256 353738 Arst7g00713 7 4869238 4871564 PCT